Pre_GI: BLASTP Hits

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Query: NC_012791:2423466:2425075 Variovorax paradoxus S110 chromosome 1, complete genome

Start: 2425075, End: 2425893, Length: 819

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:2216309:221630922163092217145837Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative RNA polymerase sigma factor WhiG8e-1684.3
NC_021177:6127431:614515861451586145994837Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor WhiG9e-1684.3
NC_003888:6103534:612104361210436121885843Streptomyces coelicolor A3(2), complete genomesigma factor WhiG3e-1582.4
NC_014377:1089894:109924110992411099978738Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-1377
NC_010001:3266561:327511932751193275883765Clostridium phytofermentans ISDg, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-1273.6
NC_012778:841934:853378853378854136759Eubacterium eligens ATCC 27750, complete genomephosphatidylserine decarboxylase4e-1272
NC_014328:1135854:115073211507321151457726Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon FliA8e-1271.2
NC_021182:2883716:289082828908282891553726Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, FliA/WhiG family8e-1270.9
NC_020291:4903981:491882649188264919557732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma factor for flagellar operon1e-1170.5
NC_006177:3192500:320519732051973205958762Symbiobacterium thermophilum IAM 14863, complete genomeRNA polymerase sigma factor related to flagellar biosynthesis2e-1170.1
NC_008346:983816:996574996574997356783Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeputative RNA polymerase sigma factor8e-1167.8
NC_012559:731859:747206747206747949744Laribacter hongkongensis HLHK9, complete genomeFliA11e-1067.4
NC_010730:1724443:172492517249251725653729Sulfurihydrogenibium sp. YO3AOP1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-1065.1
NC_020409:168916:180363180363181148786Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRNA polymerase sigma factor for flagellar operon6e-1064.7
NC_007298:778723:816228816228816974747Dechloromonas aromatica RCB, complete genomeSigma-70 region 49e-1064.3
NC_016816:1912366:194426019442601944982723Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor for flagellar operon1e-0964.3
NC_013956:2523955:252451025245102525232723Pantoea ananatis LMG 20103 chromosome, complete genomeFliA1e-0964.3
NC_012779:2281700:229874322987432299465723Edwardsiella ictaluri 93-146, complete genomeRNA polymerase sigma factor for flagellar operon2e-0963.2
NC_013940:110340:117614117614118381768Deferribacter desulfuricans SSM1 megaplasmid pDF308, completeRNA polymerase, sigma 28 subunit, FliA/WhiG family2e-0963.2
NC_012880:1765920:184124818412481841970723Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG3e-0962.4
NC_014150:233194:241288241288242106819Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG3e-0962.4
NC_009348:381752:391444391444392151708Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafS5e-0961.6
NC_017243:1499757:151441615144161515243828Brachyspira intermedia PWS/A chromosome, complete genomeRNA polymerase sigma factor WhiG1e-0860.8
NC_009654:3849774:387059938705993871336738Marinomonas sp. MWYL1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG8e-0960.8
NC_012225:377441:389172389172389999828Brachyspira hyodysenteriae WA1, complete genomeRNA polymerase sigma factor WhiG1e-0860.5
NC_008800:2695977:271399427139942714716723Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar biosynthesis sigma factor1e-0860.5
NC_015224:2017781:203906520390652039787723Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar biosynthesis sigma factor1e-0860.5
NC_012912:1788308:181042918104291811151723Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-0860.5
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor2e-0860.1
NC_018607:1134900:114385311438531144665813Brachyspira pilosicoli B2904 chromosome, complete genomeRNA polymerase sigma factor4e-0858.9
NC_019908:852230:859282859282860094813Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor WhiG4e-0858.9
NC_014330:2409559:242009924200992420911813Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor4e-0858.9
NC_018604:1329228:133817613381761338988813Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor4e-0858.9
NC_014500:3023762:303527230352723035994723Dickeya dadantii 3937 chromosome, complete genomeRNA polymerase sigma-28 (sigma F) factor5e-0858.5
NC_004547:1970686:198611819861181986840723Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar biosynthesis sigma factor FliA1e-0757.4
NC_016148:576946:580786580786581376591Thermovirga lienii DSM 17291 chromosome, complete genomeFliA/WhiG subfamily RNA polymerase sigma-28 subunit1e-0757.4
NC_016514:2950860:295907129590712959790720Enterobacter cloacae EcWSU1 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon9e-0857.4
NC_011653:1728000:174502817450281745708681Thermosipho africanus TCF52B, complete genomeRNA polymerase sigma factor for flagellar operon2e-0756.6
NC_012438:159927:161195161195161917723Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeRNA polymerase sigma-D factor (Sigma-28)3e-0755.8
NC_015422:4395388:441599244159924416708717Alicycliphilus denitrificans K601 chromosome, complete genomeRNA polymerase sigma 28 subunit FliA/WhiG3e-0755.8
NC_014910:4026613:404772340477234048439717Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, flia/whig family3e-0755.8
NC_020911:349610:353922353922354782861Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma 32 factor RpoH4e-0755.5
NC_016894:2931213:293121329312132932046834Acetobacterium woodii DSM 1030 chromosome, complete genomeRNA polymerase, sigma 28 subunit FliA9e-0754.3
NC_012917:2921932:292819629281962928918723Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-0653.5
NC_019940:293476:307389307389308144756Thioflavicoccus mobilis 8321 chromosome, complete genomeFliA/WhiG family RNA polymerase sigma factor2e-0653.5
NC_008820:2595500:2614605261460526157351131Prochlorococcus marinus str. MIT 9303, complete genomePutative type II alternative RNA polymerase sigma factor3e-0652.8