Pre_GI: BLASTP Hits

Some Help

Query: NC_011989:2549252:2560634 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 2560634, End: 2561389, Length: 756

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010161:1324381:134371113437111344532822Bartonella tribocorum CIP 105476, complete genomephage-related modification methylase2e-50199
NC_010161:1949637:196911019691101969931822Bartonella tribocorum CIP 105476, complete genomephage-related modification methylase2e-50199
NC_010161:1914000:193310719331071933928822Bartonella tribocorum CIP 105476, complete genomephage-related modification methylase2e-50199
NC_011958:923789:942015942015942821807Rhodobacter sphaeroides KD131 chromosome 2, complete genomeD12 class N6 adenine-specific DNA methyltransferase6e-50197
NC_009050:427000:427065427065427871807Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceD12 class N6 adenine-specific DNA methyltransferase6e-50197
NC_011963:3073283:308649130864913087270780Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceD12 class N6 adenine-specific DNA methyltransferase8e-50197
NC_007493:628243:646227646227647033807Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceN6 adenine-specific DNA methyltransferase, D12 class9e-50196
NC_007494:739403:744384744384745190807Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative adenine-specific DNA methyltransferase1e-49196
NC_011963:325806:341174341174341953780Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceD12 class N6 adenine-specific DNA methyltransferase2e-49195
NC_007494:867901:889223889223890029807Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceAdenine-specific DNA methyltransferase2e-47189
NC_007493:207932:223468223468224274807Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePutative N-6 adenine-specific DNA methylase3e-47188
NC_020301:669000:707879707879708697819Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeadenine-specific DNA methyltransferase1e-45183
NC_007626:506532:5114845114845126501167Magnetospirillum magneticum AMB-1, complete genomeSite-specific DNA methylase7e-45180
NC_011963:1482042:150132215013221502023702Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceD12 class N6 adenine-specific DNA methyltransferase2e-42172
NC_015381:1202061:121846112184611219246786Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA adenine methylase2e-39162
NC_015381:3457784:347117134711713471956786Burkholderia gladioli BSR3 chromosome 1, complete sequencegp274e-39161
NC_015381:2109500:211653721165372117322786Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA adenine methylase1e-38160
NC_007651:2166000:216831721683172169288972Burkholderia thailandensis E264 chromosome I, complete sequenceDNA adenine methylase2e-38159
NC_015381:3091500:311175631117563112541786Burkholderia gladioli BSR3 chromosome 1, complete sequencegp271e-37156
NC_007434:1809946:181917118191711819959789Burkholderia pseudomallei 1710b chromosome I, complete sequencegp273e-37155
NC_008390:2018201:203368920336892034477789Burkholderia cepacia AMMD chromosome 1, complete sequenceD12 class N6 adenine-specific DNA methyltransferase3e-36151
NC_012724:2202173:221359022135902214381792Burkholderia glumae BGR1 chromosome 1, complete genomeGp2723e-34145
NC_012724:3070386:308106930810693081809741Burkholderia glumae BGR1 chromosome 1, complete genomegp271e-33143
NC_012559:1663214:167124416712441672011768Laribacter hongkongensis HLHK9, complete genomeProbable methyltransferase4e-33141
NC_012779:3016327:301769130176913018449759Edwardsiella ictaluri 93-146, complete genomeDNA adenine methylase1e-32140
NC_007963:1582089:158968915896891590450762Chromohalobacter salexigens DSM 3043, complete genomeDNA adenine methylase1e-32140
NC_005773:5636606:565239656523965653190795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, putative adenine modification methytransferase2e-32139
NC_002927:3827211:383460238346023835393792Bordetella bronchiseptica RB50, complete genomemodification methylase5e-32137
NC_005773:2177184:218385621838562184650795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative adenine modification methytransferase2e-31136
NC_020209:3262000:327234632723463273140795Pseudomonas poae RE*1-1-14, complete genomeD12 class N6 adenine-specific DNA methyltransferase3e-31135
NC_005773:2177184:219452521945252195319795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative adenine modification methytransferase2e-31135
NC_015733:1976752:198370119837011984471771Pseudomonas putida S16 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase7e-31134
NC_017986:4124335:413120141312014131971771Pseudomonas putida ND6 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase2e-30132
NC_014972:2771902:278007427800742780835762Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA adenine methylase5e-30131
NC_016830:4999946:501431450143145015108795Pseudomonas fluorescens F113 chromosome, complete genomeprophage adenine modification methytransferase4e-29128
NC_004578:3817330:383004238300423830836795Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA adenine methylase, putative1e-28126
NC_015856:1152021:117670911767091177263555Collimonas fungivorans Ter331 chromosome, complete genomeprophage PSPPH02 adenine modification methytransferase6e-23107
NC_012846:986877:102308310230831023868786Bartonella grahamii as4aup, complete genomeadenine-specific DNA methyltransferase3e-22105
NC_012846:986877:102167210216721022487816Bartonella grahamii as4aup, complete genomeadenine-specific DNA methyltransferase4e-2098.6
NS_000195:526983:557148557148557969822Candidatus Cloacamonas acidaminovoransputative N6 adenine-specific DNA methyltransferase, D12 class6e-1891.3
NS_000195:219785:239076239076239891816Candidatus Cloacamonas acidaminovoransN6 adenine-specific DNA methyltransferase, D12 class2e-1789.7
NS_000195:219785:238294238294239079786Candidatus Cloacamonas acidaminovoransputative N6 adenine-specific DNA methyltransferase, D12 class1e-1584
NS_000195:526983:557966557966558742777Candidatus Cloacamonas acidaminovoransputative N6 adenine-specific DNA methyltransferase, D12 class1e-1583.6
NC_009850:1651410:165650816565081657290783Arcobacter butzleri RM4018, complete genomeN6 adenine-specific DNA methyltransferase, D12 class8e-1580.9
NC_007907:5297477:530299853029985303933936Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1479.3
NC_014376:3064787:307158830715883072409822Clostridium saccharolyticum WM1 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase3e-1479
NC_018866:1402259:141263914126391413574936Dehalobacter sp. DCA chromosome, complete genomehypothetical protein5e-1478.2
NC_014483:3339926:336025233602523361064813Paenibacillus polymyxa E681 chromosome, complete genomeSite-specific DNA methylase2e-1376.3
NC_010337:565730:580123580123581058936Heliobacterium modesticaldum Ice1, complete genomed12 class n6 adenine-specific DNA methyltransferase superfamily3e-1375.9
NC_019903:1312843:131778013177801318712933Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,site-specific DNA methylase4e-1375.5
NC_021184:3571014:358577835857783586710933Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific DNA methylase5e-1374.7
NC_019903:1345585:135280213528021353734933Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,site-specific DNA methylase1e-1273.9
NC_019903:1745849:175062817506281751566939Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,site-specific DNA methylase9e-1270.5
NC_011837:3814000:386966338696633870598936Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-1170.5
NC_009706:3882500:393816039381603939095936Clostridium kluyveri DSM 555 chromosome, complete genomeDNA methylase1e-1170.5
NC_007907:5185510:519096951909695191904936Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-1168.2
NC_019792:153661:157406157406158293888Natronobacterium gregoryi SP2 chromosome, complete genomesite-specific DNA methylase8e-1167.4
NC_019842:1172944:118561811856181186442825Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Site-specific DNA methylase1e-1067
NC_015666:3606053:363075136307513631614864Halopiger xanaduensis SH-6 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase1e-1066.6
NC_011206:1233985:124016812401681241058891Acidithiobacillus ferrooxidans ATCC 53993, complete genomeD12 class N6 adenine-specific DNA methyltransferase4e-1065.1
NC_011206:123791:128217128217129107891Acidithiobacillus ferrooxidans ATCC 53993, complete genomeD12 class N6 adenine-specific DNA methyltransferase4e-1065.1
NC_015711:8964410:8979776897977689811281353Myxococcus fulvus HW-1 chromosome, complete genomen6 adenine-specific DNA methyltransferase4e-0962
NC_009656:4527457:458478545847854585675891Pseudomonas aeruginosa PA7 chromosome, complete genomeDNA adenine methyltransferase3e-0859.3
NC_012808:3897751:3899875389987539014791605Methylobacterium extorquens AM1, complete genomeD12 class N6 adenine-specific DNA methyltransferase3e-0858.9
NC_007908:1946902:195719019571901958011822Rhodoferax ferrireducens T118, complete genomeDNA adenine methylase5e-0858.2
NC_018080:5091772:510590551059055106795891Pseudomonas aeruginosa DK2 chromosome, complete genomeDNA adenine methyltransferase8e-0857.8
NC_012030:81837:104041104041104895855Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completeD12 class N6 adenine-specific DNA methyltransferase8e-0857.8
NC_013202:418500:445975445975446829855Halomicrobium mukohataei DSM 12286, complete genomeD12 class N6 adenine-specific DNA methyltransferase2e-0756.6
NC_014623:3097675:3097675309767530990271353Stigmatella aurantiaca DW4/3-1 chromosome, complete genomen6 adenine-specific DNA methyltransferase2e-0756.2
NC_014623:3199248:3199248319924832006001353Stigmatella aurantiaca DW4/3-1 chromosome, complete genomen6 adenine-specific DNA methyltransferase2e-0756.2
NC_009767:2734166:274405227440522744921870Roseiflexus castenholzii DSM 13941, complete genomeD12 class N6 adenine-specific DNA methyltransferase2e-0755.8
NC_012660:3689223:370266737026673702993327Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0755.8
NC_012808:1979000:199122419912241992111888Methylobacterium extorquens AM1, complete genomeadenine-specific DNA methyltransferase4e-0755.5
NC_019964:2080444:209454320945432095421879Halovivax ruber XH-70, complete genomesite-specific DNA methylase4e-0755.5
NC_012724:1892000:189367518936751894580906Burkholderia glumae BGR1 chromosome 1, complete genomeD12 class N6 adenine-specific DNA methyltransferase5e-0754.7
NC_014836:1606587:1621088162108816221311044Desulfurispirillum indicum S5 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase1e-0653.9
NC_012724:1308000:131762613176261317976351Burkholderia glumae BGR1 chromosome 1, complete genomeD12 class N6 adenine-specific DNA methyltransferase1e-0653.9
NC_015850:1279372:129195212919521292872921Acidithiobacillus caldus SM-1 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase1e-0653.5
NC_004557:363628:380624380624381466843Clostridium tetani E88, complete genomeputative adenine-specific DNA methyltransferase2e-0653.1