Pre_GI: BLASTP Hits

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Query: NC_011985:61003:97269 Agrobacterium radiobacter K84 chromosome 1, complete genome

Start: 97269, End: 98153, Length: 885

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:291422:310012310012310845834Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator1e-30134
NC_012724:2443500:244352924435292444449921Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, RpiR family protein2e-30132
NC_017154:3094000:311353131135313114385855Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-30131
NC_003143:2895617:289561728956172896471855Yersinia pestis CO92, complete genomehypothetical protein7e-30131
NC_004088:1291754:129175412917541292608855Yersinia pestis KIM, complete genomehypothetical protein7e-30131
NC_008149:1221637:122163712216371222491855Yersinia pestis Nepal516, complete genomehypothetical protein7e-30131
NC_008800:4389687:438968743896874390520834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-29129
NC_008358:2257787:227156122715612272391831Hyphomonas neptunium ATCC 15444, complete genomeSIS domain protein1e-28127
NC_010505:5035668:504276550427655043655891Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, RpiR family3e-24112
NC_008254:3980327:399500239950023995925924Mesorhizobium sp. BNC1, complete genometranscriptional regulator, RpiR family6e-23108
NC_014323:3976351:402026640202664021225960Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein3e-1892.4
NC_016630:1385719:139135113913511392217867Filifactor alocis ATCC 35896 chromosome, complete genometranscriptional regulator3e-1892.4
NC_014323:3976351:403028740302874031168882Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein7e-1891.3
NC_015376:2241000:224701822470182247878861Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, RpiR family1e-1790.5
NC_014657:1193985:119567511956751196538864Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, rpir family2e-1686.7
NC_014640:6745873:679667267966726797544873Achromobacter xylosoxidans A8 chromosome, complete genomeRpiR family transcriptional regulator3e-1582.4
NC_009079:1492664:151177715117771512637861Burkholderia mallei NCTC 10247 chromosome I, complete sequencephosphosugar-binding transcriptional regulator, RpiR family5e-1582
NC_012914:336750:343488343488344321834Paenibacillus sp. JDR-2, complete genometranscriptional regulator, RpiR family5e-1272
NC_015675:6493444:650704465070446507949906Mesorhizobium opportunistum WSM2075 chromosome, complete genomeRpiR family transcriptional regulator2e-1170.1
NC_014923:5940500:595237359523735953278906Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completesugar isomerase (SIS)2e-1170.1
NC_019973:5869500:588133358813335882238906Mesorhizobium australicum WSM2073, complete genometranscriptional regulator2e-1170.1
NC_004193:375416:641553641553642401849Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator2e-1067
NC_013171:1677543:168050016805001681339840Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, RpiR family8e-1064.7
NC_015389:616430:639327639327640196870Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family4e-0962
NC_017270:1755552:176398117639811764817837Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSialic acid utilization regulator, RpiR family5e-0755.5
NC_015389:616430:643533643533644402870Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family6e-0755.1
NC_020063:2449554:247206824720682472898831Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator1e-0654.3
NC_009457:1444449:147833414783341479170837Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-0653.9
NC_012578:1838470:187236418723641873200837Vibrio cholerae M66-2 chromosome I, complete sequencePutative HTH-type transcriptional regulator ybbH1e-0653.9
NC_016445:1363831:139663113966311397446816Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completesialic acid utilization regulator RpiR family1e-0653.9
NC_012668:1688500:172144717214471722277831Vibrio cholerae MJ-1236 chromosome 1, complete sequencesialic acid utilization regulator RpiR family1e-0653.9
NC_015389:809474:815699815699816547849Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family2e-0653.5
NC_015152:272500:274117274117274971855Spirochaeta sp. Buddy chromosome, complete genomeRpiR family transcriptional regulator4e-0652.4
NC_007929:1463295:149820914982091499045837Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, RpiR family5e-0652
NC_014219:192555:206560206560207414855Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, RpiR family6e-0651.6
NC_011741:2715246:272234927223492723197849Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator8e-0651.2
CU928160:2715246:272234927223492723197849Escherichia coli IAI1 chromosome, complete genomefused putative DNA-binding transcriptional regulator; putative isomerase8e-0651.2