Pre_GI: BLASTP Hits

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Query: NC_011985:3282924:3284883 Agrobacterium radiobacter K84 chromosome 1, complete genome

Start: 3284883, End: 3285635, Length: 753

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011662:1017933:103097710309771031726750Thauera sp. MZ1T, complete genomeTatD-related deoxyribonuclease2e-95348
NC_013194:1040197:104571410457141046472759Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeTatD-related deoxyribonuclease7e-91333
NC_014217:2020737:202508820250882025834747Starkeya novella DSM 506 chromosome, complete genomeTatD-related deoxyribonuclease8e-79293
NC_010510:409469:413314413314414057744Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeTatD-related deoxyribonuclease8e-56217
NC_007086:2887875:295318029531802953908729Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-55216
NC_004431:4270305:429688342968834297608726Escherichia coli CFT073, complete genomehypothetical protein2e-52205
NC_008563:4739333:475138147513814752106726Escherichia coli APEC O1, complete genomeputative TatD-related deoxyribonuclease2e-52205
NC_013716:5201097:526263452626345263359726Citrobacter rodentium ICC168, complete genomeputative deoxyribonuclease2e-52205
NC_011742:4655373:466604346660434666768726Escherichia coli S88 chromosome, complete genomehypothetical protein2e-52205
NC_008347:2515921:252023025202302520991762Maricaulis maris MCS10, complete genomeTatD-related deoxyribonuclease1e-51203
NC_010337:98974:107449107449108192744Heliobacterium modesticaldum Ice1, complete genometatd deoxyribonuclease family2e-47189
NC_008061:190287:214772214772215506735Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceTatD-related deoxyribonuclease4e-44178
NC_010515:2111691:213909521390952139829735Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceTatD-related deoxyribonuclease4e-44178
NC_007973:2348481:236993723699372370686750Ralstonia metallidurans CH34 chromosome 1, complete sequenceTatD-related deoxyribonuclease4e-40164
NC_006582:4256915:426468942646894265444756Bacillus clausii KSM-K16, complete genomehypothetical protein2e-37155
NC_020210:788639:801554801554802300747Geobacillus sp. GHH01, complete genomehydrolase1e-31136
NC_015389:809474:841990841990842754765Coriobacterium glomerans PW2 chromosome, complete genomeTatD-related deoxyribonuclease6e-30130
NC_009338:3029507:304323130432313043971741Mycobacterium gilvum PYR-GCK chromosome, complete genomeTatD-related deoxyribonuclease4e-27121
NC_003030:1510000:154193015419301542688759Clostridium acetobutylicum ATCC 824, complete genomePredicted hydrolase of PHP superfamily6e-24111
NC_012726:1878503:190034219003421901088747Sulfolobus islandicus M.16.4 chromosome, complete genomeTatD-related deoxyribonuclease2e-1789.7
NC_005213:202400:405851405851406591741Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein4e-1581.6
NC_005213:384998:405851405851406591741Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein4e-1581.6
NC_015416:2113949:213057021305702131376807Methanosaeta concilii GP-6 chromosome, complete genomedeoxyribonuclease5e-1581.6
NC_012658:99899:106555106555107349795Clostridium botulinum Ba4 str. 657 chromosome, complete genomeTatD family hydrolase4e-1478.6
NC_007940:266000:285209285209286072864Rickettsia bellii RML369-C, complete genomePutative deoxyribonuclease TatD2e-1376.3
NC_009883:1262000:128103612810361281899864Rickettsia bellii OSU 85-389, complete genomePutative deoxyribonuclease TatD3e-1375.9
NC_016935:7872425:791189679118967912726831Paenibacillus mucilaginosus 3016 chromosome, complete genomesec-independent secretion protein TatD4e-1375.5
NC_010296:5002428:501061850106185011397780Microcystis aeruginosa NIES-843, complete genomedeoxyribonuclease4e-1375.1
NC_017295:3110748:312538631253863126147762Clostridium acetobutylicum EA 2018 chromosome, complete genomePHP superfamily hydrolase6e-1374.7
NC_003030:3112931:312612931261293126890762Clostridium acetobutylicum ATCC 824, complete genomePHP superfamily hydrolase, YABD ortholog6e-1374.7
NC_014624:140000:140111140111140881771Eubacterium limosum KIST612 chromosome, complete genomeTatD family hydrolase8e-1374.3
NC_015684:2033985:205242420524242053218795Oligotropha carboxidovorans OM5 chromosome, complete genomedeoxyribonuclease, TatD family2e-1273.2
NC_016148:678175:680950680950681741792Thermovirga lienii DSM 17291 chromosome, complete genomeTatD family hydrolase2e-1272.8
NC_013971:666730:689890689890690666777Erwinia amylovora ATCC 49946 chromosome, complete genomeTatD related DNase3e-1272
NC_004193:35698:475674756748337771Oceanobacillus iheyensis HTE831, complete genomehypothetical protein4e-1272
NC_015138:2025000:202554120255412026350810Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehydrolase, TatD family5e-1271.6
NC_012121:139741:143564143564144337774Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative TatD-related deoxyribonuclease6e-1271.2
NC_020133:2421965:243750424375042438253750Mycobacterium liflandii 128FXT, complete genomeTatD family deoxyribonuclease7e-1270.9
NC_008611:3579500:358503235850323585781750Mycobacterium ulcerans Agy99, complete genomeDNAse (TatD family)8e-1270.9
NC_019757:5931500:593806759380675938855789Cylindrospermum stagnale PCC 7417, complete genomeSec-independent protein translocase TatD1e-1170.1
NC_000854:278711:298099298099298839741Aeropyrum pernix K1, complete genomeputative deoxyribonuclease2e-1169.7
NC_019771:2945719:296011729601172960920804Anabaena cylindrica PCC 7122, complete genomeSec-independent protein translocase TatD2e-1169.3
NC_012214:745302:766183766183766959777Erwinia pyrifoliae Ep1/96, complete genomeMg-dependent DNase3e-1168.9
NC_009488:1871912:187191218719121872700789Orientia tsutsugamushi str. Boryong, complete genomehypothetical protein6e-1167.8
NC_007181:1094422:109978610997861100475690Sulfolobus acidocaldarius DSM 639, complete genomedeoxyribonuclease7e-1167.8
NC_016622:1599681:163018716301871630981795Azospirillum lipoferum 4B, complete genomeputative deoxyribonuclease TadD-like1e-1067
NC_013716:5141269:516310051631005163876777Citrobacter rodentium ICC168, complete genomeputative deoxyribonuclease1e-1067
NC_016112:2301023:231428023142802315062783Methylomicrobium alcaliphilum chromosome, complete genomeMg-dependent DNase, TatD1e-1067
NC_009053:2025782:203183620318362032624789Actinobacillus pleuropneumoniae L20, complete genomePutative Mg-dependent DNAse2e-1066.6
NC_010939:2085000:208899220889922089780789Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative Mg-dependent DNAse1e-1066.6
NC_010793:794494:794494794494795282789Orientia tsutsugamushi str. Ikeda, complete genomeMg-dependent DNase, TatD family1e-1066.6
NC_010278:1989500:199343919934391994227789Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,putative deoxyribonuclease1e-1066.6
NC_014109:393500:395246395246396046801Candidatus Riesia pediculicola USDA chromosome, complete genomeMg-dependent DNase2e-1066.2
NC_015151:665346:680616680616681332717Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeTatD-related deoxyribonuclease3e-1065.9
NC_009617:68779:748487484875660813Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeTatD family hydrolase4e-1065.5
NC_012559:2563922:256610625661062566876771Laribacter hongkongensis HLHK9, complete genomeHydrolase, TatD family precursor4e-1065.5
NC_007413:5264463:526815952681595268944786Anabaena variabilis ATCC 29413, complete genomeTatD-related deoxyribonuclease4e-1065.1
NC_010506:2441944:244194424419442442732789Shewanella woodyi ATCC 51908, complete genomehydrolase, TatD family4e-1065.1
NC_015563:3786192:381521038152103816022813Delftia sp. Cs1-4 chromosome, complete genomehydrolase, TatD family5e-1064.7
NC_006177:3457637:347001234700123470788777Symbiobacterium thermophilum IAM 14863, complete genomeTatD-related DNase6e-1064.7
NC_010505:1581429:158710815871081587908801Methylobacterium radiotolerans JCM 2831, complete genomehydrolase, TatD family6e-1064.7
NC_008312:4555499:457109045710904571911822Trichodesmium erythraeum IMS101, complete genomehydrolase, TatD family6e-1064.7
NC_014248:1072473:108793710879371088722786Nostoc azollae 0708 chromosome, complete genomeTatD family hydrolase6e-1064.7
NC_010694:715500:737052737052737828777Erwinia tasmaniensis, complete genomeMg-dependent DNase6e-1064.7
NC_016935:7872425:791426179142617915064804Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative deoxyribonuclease7e-1064.3
NC_015410:3093465:313249531324953132713219Pseudomonas mendocina NK-01 chromosome, complete genomeTatD-related deoxyribonuclease7e-1064.3
NC_017075:2733898:274949927494992750293795Rubrivivax gelatinosus IL144, complete genomeputative endodeoxyribonuclease9e-1063.9
NC_006155:2893802:290951229095122910321810Yersinia pseudotuberculosis IP 32953, complete genomeputative deoxyribonuclease9e-1063.9
NC_010634:2810815:282652428265242827333810Yersinia pseudotuberculosis PB1/+, complete genomeTatD family hydrolase9e-1063.9
NC_007484:1823751:185184718518471852632786Nitrosococcus oceani ATCC 19707, complete genomeTatD-related deoxyribonuclease1e-0963.9
NC_013161:1801904:181531718153171816114798Cyanothece sp. PCC 8802, complete genomehydrolase, TatD family1e-0963.9
NC_011726:1827000:184032518403251841122798Cyanothece sp. PCC 8801, complete genomehydrolase, TatD family1e-0963.9
NC_014923:5787493:581941858194185819714297Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-0963.5
NC_012588:1118945:112930911293091130007699Sulfolobus islandicus M.14.25 chromosome, complete genomeTatD-related deoxyribonuclease2e-0962.8
NC_010554:2646806:264680626468062647588783Proteus mirabilis HI4320, complete genomeTatD-related deoxyribonuclease2e-0962.8
NC_014831:65408:869208692087792873Thermaerobacter marianensis DSM 12885 chromosome, complete genomehydrolase, TatD family3e-0962.4
NC_010628:6165632:617006961700696170878810Nostoc punctiforme PCC 73102, complete genomehydrolase, TatD family3e-0962.4
NC_009483:5113729:511786851178685118629762Geobacter uraniireducens Rf4 chromosome, complete genomeTatD family hydrolase3e-0962.4
NC_015424:3890293:389179038917903892563774Aeromonas veronii B565 chromosome, complete genomeTatD family Mg-dependent DNase4e-0962
NC_015161:199666:202340202340203128789Deinococcus proteolyticus MRP chromosome, complete genomehydrolase, TatD family5e-0961.6
NC_003272:1862487:186553618655361866321786Nostoc sp. PCC 7120, complete genomehypothetical protein5e-0961.6
NC_019748:1634954:163830716383071639095789Stanieria cyanosphaera PCC 7437, complete genomehydrolase, TatD family5e-0961.6
NC_007333:430000:443951443951444871921Thermobifida fusca YX, complete genomeTatD-related deoxyribonuclease5e-0961.6
NC_015978:352478:383504383504384319816Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completedeoxyribonuclease YabD6e-0961.2
NC_012632:1212780:121976012197601220458699Sulfolobus islandicus M.16.27 chromosome, complete genomeTatD-related deoxyribonuclease7e-0961.2
NC_020829:1068438:108916810891681089947780Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein7e-0960.8
NC_013956:3641368:367579636757963676569774Pantoea ananatis LMG 20103 chromosome, complete genomeYjjV7e-0960.8
NC_019907:845663:874198874198874986789Liberibacter crescens BT-1 chromosome, complete genomedeoxyribonuclease8e-0960.8
NC_015672:101878:103239103239104084846Flexistipes sinusarabici DSM 4947 chromosome, complete genomehydrolase, TatD family1e-0860.5
NC_001263:132288:145257145257146045789Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein2e-0859.7
NC_014618:4010689:404169340416934042472780Enterobacter cloacae SCF1 chromosome, complete genomeTatD-related deoxyribonuclease2e-0859.7
NC_014722:1497244:149810514981051498887783Burkholderia rhizoxinica HKI 454, complete genomeDNase, TatD family2e-0859.3
NC_009465:29735:798027980280572771Candidatus Vesicomyosocius okutanii HA, complete genomeMg-dependent deoxyribonuclease2e-0859.3
NC_020908:2788852:281265028126502813447798Octadecabacter arcticus 238, complete genomeTatD family deoxyribonuclease3e-0858.9
NC_006055:44649:626396263963439801Mesoplasma florum L1, complete genomeMg2+ dependent DNAse3e-0858.9
NC_014972:2503107:250396825039682504801834Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTatD family hydrolase3e-0858.9
NC_013440:625867:644072644072644866795Haliangium ochraceum DSM 14365, complete genomehydrolase, TatD family4e-0858.5
NC_016632:951500:963636963636964412777Serratia symbiotica str. 'Cinara cedri' chromosome, completeputative deoxyribonuclease, tatD family4e-0858.5
NC_014501:5775547:578731057873105788119810Cyanothece sp. PCC 7822 chromosome, complete genomehydrolase, TatD family7e-0857.8
NC_011729:812594:820766820766821578813Cyanothece sp. PCC 7424 chromosome, complete genomeTatD family hydrolase8e-0857.4
NC_015577:3244857:324562332456233246408786Treponema azotonutricium ZAS-9 chromosome, complete genomedeoxyribonuclease TatD2e-0756.6
NC_015675:6342164:637410463741046374385282Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-0756.2
NC_010546:3583568:359650335965033597288786Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceTatD-related deoxyribonuclease3e-0755.8
NC_011761:2131911:213404521340452134815771Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeTatD family hydrolase2e-0755.8
NC_011206:2019577:201957720195772020392816Acidithiobacillus ferrooxidans ATCC 53993, complete genomeTatD-related deoxyribonuclease2e-0755.8
NC_014833:3161257:317310331731033173903801Ruminococcus albus 7 chromosome, complete genomehydrolase, TatD family3e-0755.5
NC_009439:860571:882516882516883295780Pseudomonas mendocina ymp, complete genomeTatD family hydrolase4e-0755.5
NC_015437:572788:593746593746594516771Selenomonas sputigena ATCC 35185 chromosome, complete genomehydrolase, TatD family5e-0755.1
NC_014364:2562281:256421325642132565010798Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehydrolase, TatD family6e-0754.7
NC_005072:1405884:142355214235521424346795Prochlorococcus marinus subsp. pastoris str. CCMP1986, completepossible deoxyribonuclease, TatD family7e-0754.3
NC_008817:1443983:146098614609861461780795Prochlorococcus marinus str. MIT 9515, complete genomepossible deoxyribonuclease, TatD family1e-0653.5
NC_018524:1279156:130040413004041301246843Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehydrolase, TatD family protein2e-0653.1
NC_008043:615049:641900641900642703804Silicibacter sp. TM1040 mega plasmid, complete sequenceTatD-related deoxyribonuclease2e-0653.1
NC_012914:336750:358206358206358991786Paenibacillus sp. JDR-2, complete genomehydrolase, TatD family2e-0653.1
NC_010742:955104:977124977124977918795Brucella abortus S19 chromosome 1, complete sequenceSec-independent protein TATD2e-0652.8
NC_017251:937786:959814959814960605792Brucella suis 1330 chromosome I, complete genomeTatD family hydrolase2e-0652.8
NC_016797:937753:959781959781960572792Brucella suis VBI22 chromosome I, complete sequenceTatD family hydrolase2e-0652.8
NC_004310:937800:959828959828960619792Brucella suis 1330 chromosome I, complete sequencehydrolase, TatD family2e-0652.8
NC_010103:936250:958278958278959069792Brucella canis ATCC 23365 chromosome I, complete sequencehydrolase, TatD family2e-0652.8
NC_010169:957565:979592979592980383792Brucella suis ATCC 23445 chromosome I, complete sequencehydrolase, TatD family2e-0652.8
NC_015857:963570:985596985596986387792Brucella pinnipedialis B2/94 chromosome chromosome 1, completehydrolase, TatD family2e-0652.8
NC_006932:956805:978828978828979619792Brucella abortus biovar 1 str. 9-941 chromosome I, completehydrolase, TatD family2e-0652.8
NC_017248:953131:975025975025975816792Brucella melitensis NI chromosome chromosome I, complete sequenceSEC-independent protein TATD2e-0652.8
NC_017246:956868:978905978905979696792Brucella melitensis M5-90 chromosome chromosome I, completeTatD family hydrolase2e-0652.8
NC_017244:956554:978592978592979383792Brucella melitensis M28 chromosome chromosome 1, complete sequenceSec-independent protein TATD2e-0652.8
NC_012441:956609:978636978636979427792Brucella melitensis ATCC 23457 chromosome I, complete sequenceTatD family hydrolase2e-0652.8
NC_007618:955000:975948975948976739792Brucella melitensis biovar Abortus 2308 chromosome I, completeTatD-related deoxyribonuclease2e-0652.8
NC_013119:942079:964106964106964897792Brucella microti CCM 4915 chromosome 1, complete sequencehydrolase, TatD family3e-0652.4
NC_016884:157894:181821181821182585765Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeTatD family hydrolase3e-0652.4
NC_007335:944175:962931962931963722792Prochlorococcus marinus str. NATL2A, complete genomeTatD-related deoxyribonuclease9e-0650.8
NC_008819:1531187:154994315499431550734792Prochlorococcus marinus str. NATL1A, complete genomepossible deoxyribonuclease, TatD family9e-0650.8