Pre_GI Gene

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Host: NC_008312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008312:4555499 Trichodesmium erythraeum IMS101, complete genome

Host Lineage: Trichodesmium erythraeum; Trichodesmium; ; Oscillatoriales; Cyanobacteria; Bacteria

General Information: Trichodesmium erythraeum strain IMS101 was isolated from the North Carolina coast in 1992 and grows in straight filaments. Filamentous marine cyanobacterium. This filamentous marine cyanobacterium is a nitrogen-fixing organism that contribues a significant amount of the global fixed nitrogen each year. These bacteria are unusual in that nitrogen fixation takes place in a differentiated cell called the diazocyte which is different from the nitrogen-fixing differentiated cell (heterocyst) found in other cyanobacteria. The diazocyte is developed in order to protect the oxygen-sensitive nitrogenases and includes a number of changes including production of more membranes and down-regulation of photosynthetic activity during times of peak nitrogen fixation (noontime). This organism gives the Red Sea its name when large blooms appear and is one of the organisms most often associated with large blooms in marine waters.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
455549945566411143DNA protecting protein DprAQuickGO ontologyBLASTP
45579254558137213hypothetical protein
45581804558416237hypothetical protein
45585524558815264hypothetical proteinBLASTP
455967445639214248DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
456410945661272019DNA-directed RNA polymerase gamma subunitQuickGO ontologyBLASTP
456659045698983309DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
45710904571911822hydrolase TatD familyQuickGO ontologyBLASTP
45722524572590339ribosomal protein S20QuickGO ontologyBLASTP
457338145747451365Histidinol dehydrogenaseQuickGO ontologyBLASTP
45752884575863576hypothetical proteinBLASTP
45761664577068903alphabeta hydrolase foldQuickGO ontologyBLASTP