Pre_GI: BLASTP Hits

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Query: NC_011205:2024458:2030410 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2030410, End: 2030670, Length: 261

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1896168:1901336190133619023791044Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-45181
NC_012125:2531817:2536987253698725380301044Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-45181
NC_011149:1870931:1876099187609918771421044Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein1e-45181
NC_006905:1342474:1367941136794113689841044Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-45181
NC_003197:1320861:1336322133632213373651044Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein4e-45179
NC_016810:1276340:1293175129317512942181044Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-45179
NC_016856:1326503:1346297134629713473401044Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein4e-45179
NC_016857:1276340:1293175129317512942181044Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein4e-45179
NC_016860:1317174:1334009133400913350521044Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein4e-45179
NC_016863:1277652:1294487129448712955301044Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein4e-45179
NC_017046:1277787:1293248129324812942911044Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-45179
NC_011080:1321268:1338099133809913391421044Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein4e-45179
NC_011083:1323827:1341364134136413424071044Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein4e-45179
NC_011274:1928939:1934107193410719351501044Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-45179
NC_010102:1779707:1784875178487517859181044Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-44177
NC_004631:1182883:1203467120346712045101044Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-44176
NC_016832:1182496:1202439120243912034821044Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,BNR/Asp-box repeat domain protein5e-44176
NC_003198:1771432:1776622177662217776651044Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-44176
NC_011094:1282385:1302987130298713040301044Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-44176
NC_010067:1655815:1661024166102416620671044Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-37152
NC_006511:1654959:166150116615011662463963Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-22103
NC_011147:1650142:165668416566841657601918Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-2097.1
NC_007086:1457531:1457531145753114585981068Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-0960.5
NC_010688:1435694:1435694143569414367611068Xanthomonas campestris pv. campestris, complete genomeexported exo-alpha-sialidase3e-0960.5
NC_017267:3333036:3356650335665033577531104Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeBNR-Asp-box repeat domain protein2e-0858.2
NC_010676:304405:3174813174813185811101Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein2e-0857.8
NC_020291:4305521:4311484431148443126801197Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative neuraminidase2e-0651.2