Pre_GI: BLASTP Hits

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Query: NC_011149:1710601:1728511 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1728511, End: 1728666, Length: 156

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1502096:152000615200061520422417Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island effector protein3e-22103
NC_010102:1616530:163444016344401634853414Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-22103
NC_011080:1470794:148649714864971486913417Salmonella enterica subsp. enterica serovar Newport str. SL254,secreted effector protein4e-22103
NC_006905:1509093:152474515247451525161417Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SseE4e-22103
NC_011083:1476894:149257214925721492988417Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secreted effector protein4e-22103
NC_003197:1471349:148705714870571487473417Salmonella typhimurium LT2, complete genomesecreted effector protein4e-22103
NC_011094:1435347:145096214509621451378417Salmonella enterica subsp. enterica serovar Schwarzengrund strpathogenicity island 2 effector protein SseE4e-22103
NC_011274:1763676:178158617815861782002417Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island effector protein4e-22103
NC_011294:1723852:174176217417621742178417Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island effector protein4e-22103
NC_012125:2360815:237872523787252379141417Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein4e-22103
NC_016810:1428201:144390914439091444325417Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein4e-22103
NC_006511:1506915:152482515248251525241417Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island effector protein3e-22103
NC_004631:1325817:134146313414631341879417Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island effector protein3e-22103
NC_003198:1621347:163925716392571639673417Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island effector protein3e-22103
NC_016863:1429516:144522414452241445640417Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein4e-22103
NC_016860:1469066:148474414847441485160417Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein4e-22103
NC_016857:1428201:144390914439091444325417Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein4e-22103
NC_016856:1481325:149703314970331497449417Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein4e-22103
NC_016832:1324820:134069713406971340852156Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein7e-22102
NC_017046:1428272:144424114442411444396156Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein9e-22102
NC_016831:1236786:125269112526911252846156Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island effector protein9e-22102
NC_011205:1852665:187057518705751870730156Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein9e-22102
NC_010067:1507823:152933115293311529747417Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-1889