Pre_GI: BLASTP Hits

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Query: NC_011094:688626:701068 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 701068, End: 701313, Length: 246

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2247460:225138222513822251627246Salmonella enterica subsp. enterica serovar Paratyphi A strcopper-binding protein7e-41165
NC_004631:2366335:237077523707752371020246Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible copper-binding protein7e-41165
NC_003198:598000:610081610081610326246Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible copper-binding protein7e-41165
NC_006511:2251022:225619822561982256443246Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible copper-binding protein7e-41165
NC_011205:645591:663139663139663384246Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-38158
NC_011149:588895:600991600991601236246Salmonella enterica subsp. enterica serovar Agona str. SL483,copE12e-38157
NC_011294:585500:597603597603597848246Salmonella enterica subsp. enterica serovar Enteritidis strcopper-binding protein7e-38155
NC_016831:2402893:240654924065492406794246Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative copper-binding protein7e-38155
NC_011274:603901:615976615976616221246Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-38155
NC_016832:2363136:236761523676152367821207Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-33140
NC_011080:610428:622554622554622691138Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1891.7
NC_016860:644095:656267656267656398132Salmonella enterica subsp. enterica serovar Typhimurium strcopE12e-1787.8
NC_011083:654479:666650666650666781132Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-1787.8
NC_009778:4188000:422139242213924221826435Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-0753.1
NC_011748:3958572:396834139683413968808468Escherichia coli 55989, complete genomeconserved hypothetical protein; putative exported protein5e-0753.1
CU928145:3958572:396834139683413968808468Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative exported protein5e-0753.1