Pre_GI: BLASTP Hits

Some Help

Query: NC_011094:593100:619506 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 619506, End: 620003, Length: 498

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017033:2081206:210655121065512107522972Frateuria aurantia DSM 6220 chromosome, complete genomeKilA-N domain-containing protein5e-1167
NC_009255:1369200:138016213801621380944783Burkholderia vietnamiensis G4 chromosome 2, complete sequenceKilA domain-containing protein5e-1167
NC_015761:1017301:102664110266411027171531Salmonella bongori NCTC 12419, complete genomephage protein3e-1064.3
NC_007712:3382000:339766133976613398446786Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-1062.8
NC_009654:615504:627619627619628347729Marinomonas sp. MWYL1, complete genomeKilA domain-containing protein1e-0962.4
NC_021066:2197490:221820522182052218735531Raoultella ornithinolytica B6, complete genomeKilA, N-terminal/APSES-type HTH DNA-binding domain-containing protein3e-0961.2
NC_013850:1887556:192385919238591924389531Klebsiella variicola At-22 chromosome, complete genomeKilA, N-terminal/APSES-type HTH DNA-binding domain protein5e-0960.5
NC_012796:2683711:269590526959052696240336Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-0858.9
NC_011147:2496808:250285225028522503373522Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-0858.5
NC_006511:2501500:250731625073162507837522Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-0858.5
NC_020418:2910593:291160929116092912400792Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-0858.2
NC_012731:2083650:210549521054952106424930Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-0857.4
NC_004431:3040953:305504030550403055837798Escherichia coli CFT073, complete genomehypothetical protein5e-0857
NC_011742:4962008:496541849654184966215798Escherichia coli S88 chromosome, complete genomehypothetical protein5e-0857
NC_011740:4520373:452288545228854523682798Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin5e-0857
NC_008563:5011997:501540750154075015895489Escherichia coli APEC O1, complete genomehypothetical protein6e-0857
NC_007712:1219957:121995712199571220757801Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein7e-0856.6
NC_010002:3547958:355671035567103557489780Delftia acidovorans SPH-1, complete genomeKilA domain protein8e-0856.2
NC_012779:2184927:219289221928922193452561Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-0754.7
NC_011750:5045927:506570550657055066514810Escherichia coli IAI39 chromosome, complete genomeputative KilA protein; KilA-N domain2e-0651.6
NC_004129:4333302:434784043478404348646807Pseudomonas fluorescens Pf-5, complete genomeSb463e-0651.2
NC_010501:3987615:399498839949883995743756Pseudomonas putida W619, complete genomephage antirepressor protein3e-0651.2