Pre_GI: BLASTP Hits

Some Help

Query: NC_011094:2061000:2083943 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2083943, End: 2084737, Length: 795

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:2040396:206225520622552063049795Salmonella enterica subsp. enterica serovar Agona str. SL483,sirohydrochlorin cobaltochelatase2e-154545
NC_012962:1827000:183925818392581840052795Photorhabdus asymbiotica, complete genomesirohydrochlorin cobaltochelatase3e-98358
NC_013892:853366:859521859521860315795Xenorhabdus bovienii SS-2004 chromosome, complete genomeSirohydrochlorin cobaltochelatase4e-98357
NC_009089:3998347:4013526401352640150041479Clostridium difficile 630, complete genomesirohydrochlorin cobaltochelatase2e-68258
NC_013316:3863728:3878930387893038804081479Clostridium difficile R20291, complete genomesirohydrochlorin cobaltochelatase3e-68258
NC_015275:3976631:398895239889523989749798Clostridium lentocellum DSM 5427 chromosome, complete genomeSirohydrochlorin cobaltochelatase5e-64244
NC_004557:749330:767134767134767937804Clostridium tetani E88, complete genomeanaerobic cobalt chelatase cbiK9e-60230
NC_010001:1702350:172742117274211728206786Clostridium phytofermentans ISDg, complete genomeanaerobic cobalt chelatase1e-55216
NC_021182:1245692:124668412466841247529846Clostridium pasteurianum BC1, complete genomecobalamin biosynthesis protein CbiK, Co2+ chelatase8e-55213
NC_014328:3482980:348603434860343486855822Clostridium ljungdahlii ATCC 49587 chromosome, complete genomesirohydrochlorin cobaltochelatase2e-54212
NC_014614:284005:311454311454312230777Clostridium sticklandii, complete genomeSirohydrochlorin cobaltochelatase6e-54211
NC_008593:2250871:225427922542792255070792Clostridium novyi NT, complete genomeanaerobic cobalt chelatase4e-52204
NC_003366:1427785:143016814301681431010843Clostridium perfringens str. 13, complete genomeCbiK protein3e-47188
NC_014376:869749:885384885384886181798Clostridium saccharolyticum WM1 chromosome, complete genomeSirohydrochlorin cobaltochelatase5e-47187
NC_003030:1510000:151688615168861517722837Clostridium acetobutylicum ATCC 824, complete genomeAnaerobic Cobalt chelatase, cbiK2e-43176
NC_015687:1508664:151848715184871519323837Clostridium acetobutylicum DSM 1731 chromosome, complete genomeanaerobic cobalt chelatase CbiK2e-43176
NC_017295:1507956:151630015163001517136837Clostridium acetobutylicum EA 2018 chromosome, complete genomeAnaerobic Cobalt chelatase, cbiK2e-43176
NC_010337:524605:540809540809541630822Heliobacterium modesticaldum Ice1, complete genomecobalt chelatase cbik3e-37155
NC_015737:879545:8900818900818917331653Clostridium sp. SY8519, complete genomehypothetical protein1e-36153
NC_014972:3688000:369503036950303695935906Desulfobulbus propionicus DSM 2032 chromosome, complete genomeanaerobic cobaltochelatase7e-33140
NC_011768:3854455:386032538603253861095771Desulfatibacillum alkenivorans AK-01, complete genomeanaerobic cobalt chelatase9e-30130
NC_013165:2700978:2712696271269627139401245Slackia heliotrinireducens DSM 20476, complete genomecobalamin biosynthesis protein CbiK, Co2+ chelatase1e-29130
NC_013192:107672:108934108934109701768Leptotrichia buccalis DSM 1135, complete genomeanaerobic cobalt chelatase3e-25115
NC_011883:1314624:132944613294461330228783Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,anaerobic cobalt chelatase9e-22103
NC_011059:1391734:141094214109421411895954Prosthecochloris aestuarii DSM 271, complete genomeanaerobic cobalt chelatase9e-21100
NC_006138:225832:2287912287912298011011Desulfotalea psychrophila LSv54, complete genomecobalt chelatase, chain A6e-2097.8
NC_012796:77071:781177811778998882Desulfovibrio magneticus RS-1, complete genomeputative sirohydrochlorin cobaltochelatase9e-1994
NC_010001:2176394:219285721928572193663807Clostridium phytofermentans ISDg, complete genomeanaerobic cobalt chelatase2e-1272.8
NC_014166:2149984:216319521631952164013819Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeanaerobic cobalt chelatase7e-0754.7