Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:3976631 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
397663139783221692methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
397841039799391530methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
397996639815311566o-succinylbenzoate--CoA ligaseQuickGO ontologyBLASTP
398158839825509633-Oxoacyl-acyl-carrier-protein ACP synthase III domain-containing proteinQuickGO ontologyBLASTP
398284239841491308glutamate-1-semialdehyde-21-aminomutaseQuickGO ontologyBLASTP
39841673985135969Porphobilinogen synthaseQuickGO ontologyBLASTP
398520439867211518uroporphyrin-III C-methyltransferaseQuickGO ontologyBLASTP
39867113987616906porphobilinogen deaminaseQuickGO ontologyBLASTP
398763339888741242glutamyl-tRNA reductaseQuickGO ontologyBLASTP
39889523989749798Sirohydrochlorin cobaltochelataseQuickGO ontologyBLASTP
39899323990087156hypothetical protein
399012939941454017protein of unknown function DUF291QuickGO ontologyBLASTP
39948133995748936Mg2 transporter protein CorA family proteinQuickGO ontologyBLASTP