Pre_GI: BLASTP Hits

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Query: NC_011083:2847318:2862879 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 2862879, End: 2863169, Length: 291

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:2896254:291193929119392912253315Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-49194
NC_016863:2844883:285685128568512857207357Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-49193
NC_016857:2871689:291093929109392911295357Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator2e-49193
NC_016856:2896630:290859829085982908954357Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator2e-49193
NC_016810:2871689:291093929109392911295357Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-49193
NC_003197:2870268:288837328883732888729357Salmonella typhimurium LT2, complete genomeputative transcriptional regulator2e-49193
NC_009648:3224495:324261132426113242910300Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transcriptional regulator2e-45181
NC_012912:1701231:173112317311231731410288Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family4e-35146
NC_013421:1819036:184426218442621844576315Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, XRE family5e-34142
NC_013421:1819036:184377818437781844077300Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, XRE family1e-33141
NC_012912:1701231:173067417306741730910237Dickeya zeae Ech1591, complete genomeputative transcriptional regulator3e-26117
NC_012214:474359:491886491886492143258Erwinia pyrifoliae Ep1/96, complete genometranscriptional regulator1e-21101
NC_012880:3982383:399645639964563996716261Dickeya dadantii Ech703, complete genometranscriptional regulator, XRE family7e-2199
NC_013961:441719:475157475157475414258Erwinia amylovora, complete genomeputative transcriptional regulator2e-2097.8
NC_009832:1664238:167864916786491678960312Serratia proteamaculans 568, complete genometranscriptional regulator, XRE family3e-2097.1
NC_012880:3748665:377674537767453777026282Dickeya dadantii Ech703, complete genometranscriptional regulator, XRE family5e-2096.3
NC_014500:1066911:108489610848961085162267Dickeya dadantii 3937 chromosome, complete genomehypothetical protein1e-1994.7
NC_013592:956829:975186975186975452267Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family1e-1994.7
NC_014500:1066911:108526610852661085526261Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-1994.7
NC_013592:956829:975556975556975816261Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family3e-1993.6
NC_013592:4295449:429755442975544297817264Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family4e-1993.2
NC_014500:3097362:314199831419983142255258Dickeya dadantii 3937 chromosome, complete genomeputative transcriptional regulator4e-1993.2
NC_012912:1701231:171594217159421716199258Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family6e-1992.8
NC_010625:1551430:156982615698261570158333Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, XRE family2e-1891.3
NC_012880:3748665:377637037763703776636267Dickeya dadantii Ech703, complete genometranscriptional regulator, XRE family2e-1891.3
NC_009832:4564752:458205645820564582310255Serratia proteamaculans 568, complete genometranscriptional regulator, XRE family1e-1788.2
NC_020260:3355814:337648333764833376794312Cronobacter sakazakii Sp291, complete genometranscriptional regulator4e-1786.7
NC_016612:2009927:202009120200912020369279Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-1685.1
NC_015381:1588742:160161416016141601916303Burkholderia gladioli BSR3 chromosome 1, complete sequenceXRE family transcriptional regulator2e-1684.3
NC_009708:4182460:420045342004534200809357Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeDNA binding protein4e-1683.6
NC_014500:3097362:314160631416063141884279Dickeya dadantii 3937 chromosome, complete genomeputative transcriptional regulator6e-1682.8
NC_010515:1205258:122167112216711221997327Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, XRE family8e-1682.4
NC_013282:551219:574665574665574976312Cronobacter turicensis, complete genomehypothetical protein1e-1582
NC_011001:302500:312973312973313272300Burkholderia cenocepacia J2315 chromosome 2, complete sequencerepressor protein1e-1582
NC_013364:928486:942494942494942778285Escherichia coli O111:H- str. 11128, complete genomeputative transcriptional regulator1e-1581.6
NC_013353:922937:936945936945937229285Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator1e-1581.6
AP010958:922937:936945936945937229285Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative transcriptional regulator1e-1581.6
NC_012912:1701231:171631317163131716591279Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family2e-1581.6
NC_012912:4194821:419482141948214195018198Dickeya zeae Ech1591, complete genome5e-1579.7
NC_015554:1215401:121540112154011215664264Alteromonas sp. SN2 chromosome, complete genomeXRE family transcriptional regulator6e-1579.3
NC_012792:627500:635668635668635955288Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family1e-1479
NC_011745:2209288:225872622587262259073348Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator2e-1478.2
NC_014500:4691915:469869546986954699015321Dickeya dadantii 3937 chromosome, complete genomeputative transcriptional regulator3e-1477
NC_013446:4182878:419406341940634194377315Comamonas testosteroni CNB-2, complete genometranscriptional regulator, XRE family6e-1476.3
NC_012917:4646491:465377346537734654090318Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, XRE family7e-1475.9
NC_013592:4511478:453180945318094532141333Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family1e-1375.1
NC_008322:4611000:462002446200244620347324Shewanella sp. MR-7, complete genometranscriptional regulator, XRE family1e-1375.1
NC_009074:3409849:341639534163953416706312Burkholderia pseudomallei 668 chromosome I, complete sequenceI C protein2e-1374.7
NC_013592:4511478:453250545325054532825321Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family2e-1374.7
NC_012917:4646491:465446146544614654796336Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, XRE family2e-1374.3
NC_015137:2616222:265154226515422651877336Burkholderia sp. CCGE1001 chromosome 2, complete sequencehelix-turn-helix domain-containing protein2e-1374.3
NC_015563:4024450:404130840413084041616309Delftia sp. Cs1-4 chromosome, complete genomehelix-turn-helix domain-containing protein3e-1373.9
NC_010002:3465509:347095334709533471261309Delftia acidovorans SPH-1, complete genometranscriptional regulator, XRE family3e-1373.9
NC_014306:4376012:437939943793994379686288Erwinia billingiae Eb661, complete genomeXRE family transcriptional regulator4e-1373.2
NC_014500:4691915:469797946979794698317339Dickeya dadantii 3937 chromosome, complete genometranscriptional regulator6e-1372.8
NC_016845:4498097:451276945127694512963195Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-1272
NC_020541:1827689:183457118345711834903333Rhodanobacter sp. 2APBS1, complete genomeputative transcription factor, MBF1 like protein3e-1270.9
NC_002505:168532:177450177450177758309Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, putative9e-1268.9
NC_012667:703852:722799722799723107309Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein9e-1268.9
NC_012668:442601:461228461228461536309Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein9e-1268.9
NC_016445:2593800:260271826027182603026309Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein9e-1268.9
NC_016944:168530:177448177448177756309Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein9e-1268.9
NC_004459:3243987:326552532655253265842318Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative transcriptional regulator1e-1168.2
NC_007508:1221500:123498212349821235338357Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, XRE family2e-1168.2
NC_015554:4824000:483031748303174830646330Alteromonas sp. SN2 chromosome, complete genomeputative transcriptional regulator3e-1167.4
NC_010688:1192410:120134712013471201685339Xanthomonas campestris pv. campestris, complete genomeputative transcriptional regulator3e-1167.4
NC_014500:443874:462830462830462991162Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-1064.7
NC_011663:4943179:495663949566394956953315Shewanella baltica OS223 chromosome, complete genomeXRE family transcriptional regulator2e-1064.7
NC_010515:1205258:122126812212681221603336Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, XRE family2e-1064.7
NC_011001:302500:313367313367313702336Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative repressor protein3e-1063.5
NC_003919:3812778:386787438678743868212339Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-0961.6
NC_010688:3030873:305850730585073058869363Xanthomonas campestris pv. campestris, complete genometranscriptional regulator protein9e-0958.9
NC_003919:1716831:173352317335231733819297Xanthomonas axonopodis pv. citri str. 306, complete genometranscriptional regulator1e-0858.9
NC_016010:1169850:117870511787051179109405Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeputative transcriptional regulator HipB1e-0858.9
NC_016010:1822212:186281218628121863174363Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetranscriptional regulator1e-0858.5
NC_003902:1858349:187450218745021874843342Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-0858.5
NC_010943:2465976:247714624771462477472327Stenotrophomonas maltophilia K279a, complete genomeputative transcriptional repressor protein1e-0858.5
NC_008577:4611431:463621346362134636524312Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, XRE family5e-0856.6
NC_010688:3515885:355703035570303557416387Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-0754.3