Pre_GI: BLASTP Hits

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Query: NC_010501:3671517:3677557 Pseudomonas putida W619, complete genome

Start: 3677557, End: 3678495, Length: 939

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:409899:415007415007415945939Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-168591
NC_015733:2581324:262753126275312628469939Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-165581
NC_009512:3334579:334071933407193341657939Pseudomonas putida F1, complete genomedomain of unknown function DUF17382e-158558
NC_012660:2045398:2094201209420120952531053Pseudomonas fluorescens SBW25 chromosome, complete genomeputative traC-like DNA primase6e-115414
NC_016830:3869572:388559838855983886557960Pseudomonas fluorescens F113 chromosome, complete genomedna primase8e-114410
NC_007492:3462929:346993534699353470897963Pseudomonas fluorescens PfO-1, complete genomeprobable DNA primase8e-114410
NC_014532:3596097:362516036251603626101942Halomonas elongata DSM 2581, complete genomedomain of unknown function DUF17387e-83307
NC_013716:3512950:352007635200763520987912Citrobacter rodentium ICC168, complete genomeputative conjugative transfer system protein TraC (fragment)5e-79294
NC_010067:3056774:307224830722483073159912Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-78291
NC_012214:3303955:330581433058143306794981Erwinia pyrifoliae Ep1/96, complete genomeputative antirestriction protein3e-73275
NC_012214:537000:552064552064553044981Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein3e-73275
NC_016845:4498097:450545245054524506432981Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,antirestriction protein9e-73273
NC_014121:489500:510128510128511111984Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-72272
NC_015566:345084:3716523716523726591008Serratia sp. AS12 chromosome, complete genomehypothetical protein6e-72271
NC_015567:346500:3718383718383728451008Serratia sp. AS9 chromosome, complete genomehypothetical protein6e-72271
NC_014304:77715:790657906580051987Erwinia billingiae Eb661 plasmid pEB102, complete sequenceAntirestriction protein, ArdC family1e-71270
NC_009832:426993:4431744431744442081035Serratia proteamaculans 568, complete genomedomain of unknown function DUF17387e-72270
NC_011745:3443371:3460061346006134611431083Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-71267
NC_009832:4564752:4578801457880145798081008Serratia proteamaculans 568, complete genomedomain of unknown function DUF17387e-71267
NC_009832:4482500:4497973449797344989831011Serratia proteamaculans 568, complete genomedomain of unknown function DUF17381e-70266
NC_010102:4557037:456908345690834570075993Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-70266
NC_010554:2789722:279871827987182799692975Proteus mirabilis HI4320, complete genomeDNA primase2e-70265
NC_014029:331919:3898513898513908611011Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-70264
NC_012731:560199:5813865813865823871002Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative antirestriction protein3e-69261
NC_012779:346998:3654063654063664611056Edwardsiella ictaluri 93-146, complete genomeDNA primase TraC1e-67256
NC_016816:4129299:417370041737004174680981Pantoea ananatis LMG 5342, complete genomeantirestriction protein ArdC6e-67254
NC_016809:112410:130400130400131353954Haemophilus influenzae 10810, complete genomeantirestriction protein1e-60233
NC_011283:1901229:190566619056661906616951Klebsiella pneumoniae 342 chromosome, complete genomeantirestriction protein3e-60232
NC_011745:2209288:2213451221345122144971047Escherichia coli ED1a chromosome, complete genomeputative Antirestriction protein ardC8e-59227
NC_004547:1837500:185740318574031858335933Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeantirestriction protein6e-58224
NC_006371:1743982:177676117767611777738978Photobacterium profundum SS9 chromosome 2, complete sequenceHypothetical antirestriction protein5e-57221
NC_016818:1795576:180246718024671803411945Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeantirestriction protein4e-57221
NC_011283:1811000:182691418269141827858945Klebsiella pneumoniae 342 chromosome, complete genomeantirestriction protein1e-56219
NC_009998:62000:6467564675659791305Shewanella baltica OS195 plasmid pS19501, complete sequencedomain of unknown function DUF17382e-56219
NC_016626:1751159:175916617591661760056891Burkholderia sp. YI23 plasmid byi_1p, complete sequenceantirestriction protein1e-55217
NC_015422:3581848:358714935871493588114966Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein4e-55215
NC_014500:3175283:3189619318961931906441026Dickeya dadantii 3937 chromosome, complete genomeantirestriction protein8e-55214
NC_012731:3411161:346374434637443464691948Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeantirestriction protein9e-55214
NC_011751:2327014:2327959232795923290981140Escherichia coli UMN026 chromosome, complete genomeputative Antirestriction protein ardC1e-54213
NC_016845:3448881:348286634828663483810945Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative Antirestriction protein ardC1e-54213
NC_014972:137184:144735144735145655921Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein4e-54211
NC_016612:5296076:530133753013375302284948Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative Antirestriction protein ardC2e-53209
NC_015259:673662:707112707112708053942Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase M, neutral zinc metallopeptidase, zinc-binding site7e-52204
NC_009668:445134:480142480142481098957Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein1e-51203
NC_015675:6276357:627871462787146279676963Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein2e-51202
NC_019973:5650646:565300356530035653965963Mesorhizobium australicum WSM2073, complete genomeantirestriction protein2e-51202
NC_014923:5721686:572404357240435725005963Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completedomain of unknown function DUF17382e-51202
NC_013730:2359939:2382278238227823833661089Spirosoma linguale DSM 74, complete genomedomain of unknown function DUF17381e-49197
NC_009485:3461051:348047734804773481433957Bradyrhizobium sp. BTAi1 chromosome, complete genomeardC antirestriction protein3e-49195
NC_015259:485015:504960504960505904945Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase M, neutral zinc metallopeptidase, zinc-binding site5e-49194
NC_017075:1674758:169543616954361696341906Rubrivivax gelatinosus IL144, complete genomeantirestriction protein ArdC8e-49194
NC_010725:3273261:328658832865883287538951Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF17387e-48191
NC_014414:1140357:117425711742571175156900Parvularcula bermudensis HTCC2503 chromosome, complete genomeantirestriction protein4e-47188
NC_011149:4677412:468302346830234683661639Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-47188
NC_009445:6621996:664501266450126645929918Bradyrhizobium sp. ORS 278 chromosome, complete genomeantirestriction protein3e-47188
NC_011666:2109274:213260021326002133499900Methylocella silvestris BL2, complete genomedomain of unknown function DUF17389e-47187
NC_007964:328825:339511339511340377867Nitrobacter hamburgensis X14, complete genomeantirestriction protein1e-46186
NC_014973:595153:614487614487615380894Geobacter sp. M18 chromosome, complete genomehypothetical protein2e-46186
NC_012483:729000:7369567369567379721017Acidobacterium capsulatum ATCC 51196, complete genomeputative antirestriction protein ArdC2e-46186
NC_015259:624979:641779641779642687909Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase M, neutral zinc metallopeptidase, zinc-binding site7e-46184
NC_012988:1280610:1283121128312112841281008Methylobacterium extorquens DM4, complete genomeAntirestriction protein4e-45182
NC_014973:3290545:330162333016233302504882Geobacter sp. M18 chromosome, complete genomehypothetical protein2e-44179
NC_012918:1697860:171901317190131719906894Geobacter sp. M21 chromosome, complete genomehypothetical protein7e-44177
NC_013422:1755875:1778690177869017799221233Halothiobacillus neapolitanus c2, complete genomedomain of unknown function DUF17383e-43175
NC_014973:3452100:345278634527863453679894Geobacter sp. M18 chromosome, complete genomehypothetical protein5e-43174
NC_015580:293803:315591315591316568978Novosphingobium sp. PP1Y, complete genomeArdC5e-42171
NC_015221:12389:3452534525374162892Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencehypothetical protein8e-42171
NC_011369:1135592:117366411736641174563900Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completehypothetical protein9e-42170
NC_010172:3946644:396319539631953964049855Methylobacterium extorquens PA1, complete genomedomain of unknown function DUF17384e-41168
NC_003869:1971766:197310519731051973971867Thermoanaerobacter tengcongensis MB4, complete genomeantirestriction protein4e-40165
NC_014507:2034000:205169320516932052523831Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein1e-39163
NC_013731:55627:772597725978218960Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencedomain of unknown function DUF17385e-39161
NC_015259:3902136:391798839179883918893906Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase M, neutral zinc metallopeptidase, zinc-binding site4e-38158
NC_018000:2054098:205409820540982054919822Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein9e-37154
NC_009720:583060:593720593720594448729Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-36154
NC_009792:3245368:326259432625943263190597Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-36153
NC_017047:2042346:205801420580142058757744Rahnella aquatilis HX2 chromosome, complete genomeantirestriction protein2e-36153
NC_008781:2655071:2664051266405126652051155Polaromonas naphthalenivorans CJ2, complete genomedomain of unknown function DUF17381e-36153
NC_015694:48344:641366413665059924Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequencehypothetical protein4e-36152
NC_016609:7608723:760872376087237609625903Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein4e-36152
NC_015152:2549756:255597725559772556867891Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein7e-35147
NC_013132:7954000:797334579733457974238894Chitinophaga pinensis DSM 2588, complete genomedomain of unknown function DUF17382e-34146
NC_015152:1994659:200931820093182010208891Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein5e-34145
NC_009720:583060:6003046003046014631160Xanthobacter autotrophicus Py2, complete genome7e-34144
NC_007802:3252300:325716432571643258141978Jannaschia sp. CCS1, complete genomeAntirestriction protein-like3e-33142
NC_014220:2037560:205675720567572057602846Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomedomain of unknown function DUF17382e-32140
NC_014836:1551965:157210815721081572953846Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein2e-32139
NC_009792:3245368:326317732631773263533357Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-31137
NC_014721:2135500:214140521414052142358954Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein3e-30132
NC_012034:2555447:256040625604062561347942Anaerocellum thermophilum DSM 6725, complete genomedomain of unknown function DUF17387e-30131
NC_017068:1401352:1419030141903014202981269Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein5e-28125
NC_015942:1920693:1920693192069319231222430Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein3e-28125
NC_010338:2136193:215044921504492151225777Caulobacter sp. K31, complete genomedomain of unknown function DUF17389e-27120
NC_006873:1:1147114721571011Bacteroides fragilis NCTC 9343 plasmid pBF9343, complete sequencehypothetical protein1e-26120
NC_017025:1761918:1766124176612417682622139Flavobacterium indicum GPTSA100-9, complete genomehypothetical protein1e-26120
NC_015164:4053765:4072279407227940734631185Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein1e-25117
NC_003198:4453457:4467675446767544696241950Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-26117
NC_012125:4536383:4550636455063645525851950Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-26117
NC_016832:4425330:4439548443954844414971950Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-26117
NC_011206:200000:2199482199482250985151Acidithiobacillus ferrooxidans ATCC 53993, complete genomedomain of unknown function DUF17382e-25116
NC_014914:127873:145017145017145982966Taylorella equigenitalis MCE9 chromosome, complete genomeToprim subdomain protein2e-25116
NC_015850:1279372:1289099128909912918882790Acidithiobacillus caldus SM-1 chromosome, complete genomeDNA primase7e-25114
NC_012962:3864000:3870561387056138724111851Photorhabdus asymbiotica, complete genomehypothetical protein9e-25114
NC_011206:1264639:1264639126463912690124374Acidithiobacillus ferrooxidans ATCC 53993, complete genomedomain of unknown function DUF17389e-25114
NC_010602:2244729:231819323181932319149957Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein2e-22106
NC_010842:2310756:232357923235792324535957Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeantirestriction protein2e-22106
NC_009614:4201098:4233512423351242348371326Bacteroides vulgatus ATCC 8482 chromosome, complete genomeDNA primase3e-22105
NC_003228:2010643:207068020706802071654975Bacteroides fragilis NCTC 9343, complete genomeputative DNA primase8e-22104
NC_016776:5174606:517958851795885180562975Bacteroides fragilis 638R, complete genomeputative DNA primase1e-21104
NC_010338:2136193:215442621544262154869444Caulobacter sp. K31, complete genomeAntirestriction protein-like protein3e-21102
NC_011149:4677412:468363146836314683933303Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-21102
NC_007802:1240989:125686412568641257463600Jannaschia sp. CCS1, complete genomeAntirestriction protein-like8e-21101
NC_014370:885937:9325609325609338791320Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein8e-21101
NC_013421:701005:7323617323617343221962Pectobacterium wasabiae WPP163, complete genomedomain of unknown function DUF17384e-1892
NC_015164:438000:4430504430504447381689Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein7e-1891.3
NC_004547:639726:6551506551506571111962Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein9e-1787.8
NC_017047:2042346:205991720599172060183267Rahnella aquatilis HX2 chromosome, complete genomeantirestriction protein1e-1584
NC_006347:3285998:3305547330554733072291683Bacteroides fragilis YCH46, complete genomeputative DNA primase2e-1583.2
NC_012969:2136243:2159427215942721606291203Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein6e-1581.6
NC_009720:870194:886965886965887186222Xanthobacter autotrophicus Py2, complete genomeputative ArdC antirestriction protein4e-0962.4