Pre_GI: BLASTP Hits

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Query: NC_010067:2488141:2505951 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2505951, End: 2506400, Length: 450

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:2488141:251155225115522512001450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-77286
NC_016514:1627664:163883616388361639285450Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein6e-70262
NC_013971:465318:477848477848478300453Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-60230
NC_013961:3269368:329308232930823293534453Erwinia amylovora, complete genomeCOG3518: putative type VI secretion system, core protein2e-60230
NC_014121:1822895:184423118442311844686456Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein1e-56218
NC_011283:2103500:212274421227442123187444Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system lysozyme-like protein2e-53207
NC_017060:125480:155976155976156407432Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion system lysozyme-like protein1e-48191
NC_010465:2820500:283999128399912840443453Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system lysozyme-related protein7e-48189
NC_017265:2557476:257949725794972579949453Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-48188
NC_017168:3948514:397053539705353970987453Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-48188
NC_014029:1760948:176258917625891763041453Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-48188
NC_009708:2788855:280954528095452809997453Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein8e-48188
NC_009381:1655731:167642916764291676881453Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-48188
NC_014837:3766426:378651337865133786953441Pantoea sp. At-9b chromosome, complete genometype VI secretion system lysozyme-like protein6e-46182
NC_012962:4427000:443157544315754432009435Photorhabdus asymbiotica, complete genomehypothetical protein3e-42170
NC_008253:2965573:297080029708002971228429Escherichia coli 536, complete genomehypothetical protein9e-36148
NC_011742:3057444:306247930624793062907429Escherichia coli S88 chromosome, complete genomehypothetical protein3e-35147
NC_007946:3125577:313061231306123131040429Escherichia coli UTI89, complete genomehypothetical protein3e-35147
NC_011283:942594:942594942594943019426Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system lysozyme-like protein3e-34143
NC_009648:3476000:349658834965883497013426Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein4e-34143
NC_004088:2937077:295909829590982959367270Yersinia pestis KIM, complete genomehypothetical protein8e-24108
NC_016590:1183470:120992912099291210387459Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein1e-21101
NC_009255:2044291:206250020625002062931432Burkholderia vietnamiensis G4 chromosome 2, complete sequenceGPW/gp25 family protein1e-21101
NC_009255:1250939:125408812540881254519432Burkholderia vietnamiensis G4 chromosome 2, complete sequenceGPW/gp25 family protein3e-21100
NC_010067:2488141:250890525089052509060156Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-1992.4
NC_014107:171170:190340190340190498159Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,putative transposase1e-1065.1
NC_004088:2937077:295936029593602959551192Yersinia pestis KIM, complete genomehypothetical protein1e-0962