Pre_GI: BLASTP Hits

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Query: NC_010067:1655815:1675182 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 1675182, End: 1675472, Length: 291

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008563:1175035:119680211968021197110309Escherichia coli APEC O1, complete genomelambda prophage Bor protein3e-33140
NC_011742:1177946:120032412003241200617294Escherichia coli S88 chromosome, complete genomelipoprotein; DLP12 prophage3e-33140
NC_013361:3112023:311716031171603117453294Escherichia coli O26:H11 str. 11368 chromosome, complete genomeBor protein8e-33138
NC_012967:531000:550069550069550362294Escherichia coli B str. REL606 chromosome, complete genomeputative lipoprotein8e-33138
NC_012947:3231893:323531732353173235610294Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeBor family protein8e-33138
NC_013941:699286:716748716748717041294Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLambdoid prophage DLP12 Bor-like protein2e-32137
NC_011740:2769961:277486527748652775206342Escherichia fergusonii ATCC 35469, complete genomeputative lipoprotein; DLP12 prophage3e-32136
NC_020064:1962172:198088019808801981170291Serratia marcescens FGI94, complete genomeBor protein4e-31132
NC_012759:461680:480583480583480876294Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative lipoprotein4e-30129
AC_000091:558920:577823577823578116294Escherichia coli W3110 DNA, complete genomepredicted lipoprotein4e-30129
NC_010473:623810:630415630415630708294Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted lipoprotein4e-30129
NC_000913:558920:577823577823578116294Escherichia coli K12, complete genomeDLP12 prophage; predicted lipoprotein4e-30129
NC_010473:498252:517155517155517448294Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted lipoprotein4e-30129