Pre_GI: BLASTP Hits

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Query: NC_009708:853063:862574 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 862574, End: 863953, Length: 1380

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:3762532:3769257376925737706361380Yersinia pseudotuberculosis PB1/+, complete genomeanion transporter0802
NC_006155:3846315:3856201385620138575801380Yersinia pseudotuberculosis IP 32953, complete genomeSodium:sulfate symporter, DASS family0802
NC_010465:868402:8818248818248832031380Yersinia pseudotuberculosis YPIII, complete genomeanion transporter0798
NC_009707:36024:5459854598559651368Campylobacter jejuni subsp. doylei 269.97 chromosome, completeCitT protein2e-126452
NC_010519:71365:9273592735941231389Haemophilus somnus 2336 chromosome, complete genomeanion transporter2e-126452
NC_008309:190550:2195322195322209201389Haemophilus somnus 129PT, complete genomeconserved transporter, NadC family2e-126452
NC_014541:1231021:1234607123460712359981392Ferrimonas balearica DSM 9799 chromosome, complete genomeanion transporter2e-119429
NC_009092:2902171:2929103292910329304941392Shewanella loihica PV-4, complete genomeanion transporter1e-112407
NC_009635:905768:9087559087559101251371Methanococcus aeolicus Nankai-3 chromosome, complete genomeanion transporter3e-70266
NC_013887:1462918:1480370148037014816681299Methanocaldococcus sp. FS406-22 chromosome, complete genomeanion transporter6e-56218
NC_013156:573037:5919145919145932121299Methanocaldococcus fervens AG86, complete genomeanion transporter2e-55216
NC_000909:597692:5976925976925989901299Methanocaldococcus jannaschii DSM 2661, complete genomemembrane bound transport protein, putative5e-55215
NC_006138:857692:8633748633748652541881Desulfotalea psychrophila LSv54, complete genomesimilar to Na/dicarboxylate cotransporter5e-43175
NC_015740:2614317:2616696261669626181441449Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completedi- and tricarboxylate transporter7e-43175
NC_018524:2423016:2441234244123424427991566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein1e-40167
NC_016599:513357:5311825311825325971416Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeanion transporter7e-35148
NC_016800:163436:1677651677651693391575Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein8e-35148
NC_016782:152764:1570571570571586311575Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein2e-34147
NC_016799:167362:1726521726521742261575Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein2e-34147
NC_017068:2569609:2569609256960925711531545Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative sodium-dependent dicarboxylate transporter8e-34145
NC_006322:741516:7686787686787701021425Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-33144
NC_016787:135677:1447671447671463411575Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein3e-33143
NC_015731:169989:1748541748541762361383Nitrosomonas sp. Is79A3 chromosome, complete genomeanion transporter3e-31136
NC_018524:2423016:2442893244289324444581566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein2e-30134
NC_015216:328598:3459073459073473041398Methanobacterium sp. AL-21 chromosome, complete genomeanion transporter1e-29130
NC_013523:959625:9596259596259612171593Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeanion transporter2e-28127
NC_009663:982048:9937359937359950811347Sulfurovum sp. NBC37-1, complete genomesodium:sulphate symporter2e-26120
NC_014371:177536:2179952179952194611467Prevotella melaninogenica ATCC 25845 chromosome chromosome II,transporter, divalent anion:Na+ symporter (DASS) family protein4e-26119
NC_008268:3162824:3182291318229131838981608Rhodococcus sp. RHA1, complete genomesodium symporter, ABC superfamily3e-25116
NC_013850:4612812:4622887462288746241491263Klebsiella variicola At-22 chromosome, complete genomeanion transporter4e-24112
NC_011283:4767269:4777344477734447786061263Klebsiella pneumoniae 342 chromosome, complete genometransporter divalent anion:Na+ symporter (DASS) family4e-24112
NC_007519:1244198:1266034126603412673801347Desulfovibrio alaskensis G20 chromosome, complete genomecation transporter3e-23109
NC_011274:793681:8055978055978068651269Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cation transporter8e-21102
NC_011080:819103:8329038329038341711269Salmonella enterica subsp. enterica serovar Newport str. SL254,anion transporter8e-21102
NC_011149:779903:7922257922257934931269Salmonella enterica subsp. enterica serovar Agona str. SL483,anion transporter1e-20101
NC_016831:2209834:2216286221628622175541269Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-20100
NC_010102:2287934:2294382229438222956501269Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-20100
NC_011083:862901:8767898767898780571269Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,anion transporter2e-20100
NC_011205:839425:8527338527338540011269Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853anion transporter2e-20100
NC_016810:819489:8278068278068290741269Salmonella enterica subsp. enterica serovar Typhimurium strputative cation transporter2e-20100
NC_016857:819429:8278068278068290741269Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative divalent ion symporter2e-20100
NC_017046:819414:8277918277918290591269Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation transporter2e-20100
NC_016856:819482:8289138289138301601248Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cation transporter2e-20100
NC_016863:819478:8289138289138301601248Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cation transporter2e-20100
NC_009454:1577319:1605519160551916069491431Pelotomaculum thermopropionicum SI, complete genomedi- and tricarboxylate transporters4e-2099.8
NC_012125:793812:8057508057508070181269Salmonella enterica subsp. enterica serovar Paratyphi C straincation transporter6e-2099
NC_009648:838000:8487758487758500431269Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative response regulator, membrane protein1e-1998.6
NC_006905:848000:8571968571968584641269Salmonella enterica subsp. enterica serovar Choleraesuis strputative cation transporter1e-1997.8
NC_003197:815964:8285718285718298181248Salmonella typhimurium LT2, complete genomeputative cation transporter3e-1997.1
NC_016860:857500:8673808673808686481269Salmonella enterica subsp. enterica serovar Typhimurium stranion transporter3e-1997.1
NC_016584:1998000:2016301201630120177131413Desulfosporosinus orientis DSM 765 chromosome, complete genomeanion transporter1e-1894.7
NC_009454:1577319:1612997161299716144271431Pelotomaculum thermopropionicum SI, complete genomedi- and tricarboxylate transporters2e-1893.6
NC_012881:3727150:3736847373684737380251179Desulfovibrio salexigens DSM 2638, complete genomesodium/sulphate symporter2e-1790.9
NC_014624:287500:2952402952402965141275Eubacterium limosum KIST612 chromosome, complete genometransporter7e-1789
NC_015387:1803938:1837125183712518385551431Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeanion transporter6e-1685.9
NC_010718:2860096:2860096286009628613401245Natranaerobius thermophilus JW/NM-WN-LF, complete genomeanion transporter4e-1582.8
NC_006138:857692:865341865341865703363Desulfotalea psychrophila LSv54, complete genomesimilar to Na/dicarboxylate cotransporter1e-1481.3
NC_014392:1935130:1955771195577119570361266Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeCitrate transporter2e-1377.4
NC_014634:28690:3242532425338461422Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequenceanion transporter8e-1375.5
NC_015589:814530:8365698365698380771509Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesodium/sulfate symporter5e-1169.3
NC_014844:659829:6635236635236648361314Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomesodium/sulphate symporter2e-1067.8
NC_014926:608894:6143656143656161371773Thermovibrio ammonificans HB-1 chromosome, complete genomeTrkA-C domain protein2e-1067.8
NC_014541:2510819:2528787252878725301271341Ferrimonas balearica DSM 9799 chromosome, complete genomeCitrate transporter3e-1067
NC_015733:3736104:3736104373610437379331830Pseudomonas putida S16 chromosome, complete genomecitrate transporter4e-0963.2
NC_014831:2224733:2239157223915722405991443Thermaerobacter marianensis DSM 12885 chromosome, complete genomeanion transporter5e-0962.8
NC_007644:362000:3877203877203891321413Moorella thermoacetica ATCC 39073, complete genomeanion transporter2e-0861.2
NC_015565:1281397:1291717129171712931681452Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeanion transporter2e-0860.8
NC_014759:4133809:4146497414649741482901794Marivirga tractuosa DSM 4126 chromosome, complete genomecitrate transporter3e-0860.5
NC_015731:1731896:1731896173189617336711776Nitrosomonas sp. Is79A3 chromosome, complete genomeTrkA-C domain-containing protein3e-0860.1
NC_009655:195500:2166372166372180941458Actinobacillus succinogenes 130Z chromosome, complete genomeanion transporter4e-0859.7
NC_014829:4057318:4067423406742340691981776Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeTrkA-C domain protein6e-0859.3
NC_019902:1061432:1097802109780210996191818Thioalkalivibrio nitratireducens DSM 14787, complete genomeSLC13 permease family protein8e-0858.9
NC_017068:1480148:1482222148222214834211200Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative sodium/sulfate symporter9e-0858.5
NC_008319:171847:2030882030882048421755Synechococcus sp. CC9311, complete genomeDi/tricarboxylate transporter2e-0757.8
NC_014297:476510:4765104765104783181809Halalkalicoccus jeotgali B3 chromosome, complete genomearsenite transport protein3e-0756.6
NC_013199:392450:4147954147954162791485Lactobacillus rhamnosus Lc 705, complete genomepredicted ORF5e-0756.2
NC_009615:919495:9332429332429347951554Parabacteroides distasonis ATCC 8503 chromosome, complete genomeNa+/sulfate symporter6e-0755.8
NC_015565:1281397:1293258129325812945411284Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeCitrate transporter7e-0755.8
NC_010554:1871000:1893195189319518950241830Proteus mirabilis HI4320, complete genomecation transporter1e-0655.1
NC_009831:3612206:3615825361582536175521728Shewanella sediminis HAW-EB3, complete genomeTrkA-C domain protein3e-0653.5
NC_009337:715500:7373387373387391191782Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeTrkA domain-containing protein6e-0652.8