Pre_GI: BLASTP Hits

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Query: NC_009708:633054:648718 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 648718, End: 649056, Length: 339

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:660207:675604675604676206603Yersinia pseudotuberculosis YPIII, complete genomeputative phage terminase, small subunit1e-62237
NC_010634:4001154:400257640025764003178603Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein5e-61232
NC_006155:4062000:406237040623704062972603Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-61232
NC_004088:3923804:392380439238043924145342Yersinia pestis KIM, complete genomehypothetical protein1e-58224
NC_008149:587689:607927607927608265339Yersinia pestis Nepal516, complete genomehypothetical protein9e-59224
NC_005810:3272765:329055032905503290888339Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein9e-59224
NC_009381:460358:480323480323480661339Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein9e-59224
NC_014029:729675:749906749906750244339Yersinia pestis Z176003 chromosome, complete genomehypothetical protein9e-59224
NC_017154:671816:692058692058692396339Yersinia pestis D106004 chromosome, complete genomehypothetical protein9e-59224
NC_010505:4396800:441421544142154414817603Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein3e-0960.5
NC_013941:3182576:318420131842013184773573Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage terminase, small subunit2e-0651.2
NC_012967:786534:791455791455792006552Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-0651.2