Pre_GI: BLASTP Hits

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Query: NC_009708:3903598:3914167 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 3914167, End: 3914325, Length: 159

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3982020:399258839925883992746159Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-22103
NC_009381:3596000:360767836076783607836159Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-22103
NC_004088:4116676:412724441272444127402159Yersinia pestis KIM, complete genomehypothetical protein2e-22103
NC_005810:4224500:423367942336794233837159Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-22103
NC_010159:809663:821272821272821430159Yersinia pestis Angola, complete genomehypothetical protein2e-22103
NC_008150:4561633:456943845694384569596159Yersinia pestis Antiqua, complete genomehypothetical protein2e-22103
NC_008149:402599:410405410405410563159Yersinia pestis Nepal516, complete genomehypothetical protein2e-22103