Pre_GI: BLASTP Hits

Some Help

Query: NC_009708:2788855:2847134 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2847134, End: 2847574, Length: 441

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008150:844727:865616865616866077462Yersinia pestis Antiqua, complete genomehypothetical protein3e-83306
NC_006155:1756000:177313017731301773570441Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-83305
NC_017265:2586729:261385526138552614295441Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-83305
NC_005810:1467772:148259514825951483083489Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-83305
NC_003143:1630000:165368416536841654172489Yersinia pestis CO92, complete genomehypothetical protein4e-83305
NC_008149:2802392:282951828295182830006489Yersinia pestis Nepal516, complete genomehypothetical protein4e-83305
NC_004088:2966331:299345429934542993942489Yersinia pestis KIM, complete genomehypothetical protein4e-83305
NC_009381:1682000:171079317107931711281489Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-83305
NC_017168:3977767:400489940048994005387489Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-83305
NC_010634:1755548:177348617734861773818333Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein9e-60228
NC_010159:3120642:313601431360143136346333Yersinia pestis Angola, complete genomehypothetical protein9e-60228
NC_010465:2820500:285867828586782859010333Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein9e-60228
NC_014029:1702338:172335617233561723688333Yersinia pestis Z176003 chromosome, complete genomehypothetical protein9e-60228
NC_017154:1644404:166542316654231665755333Yersinia pestis D106004 chromosome, complete genomehypothetical protein9e-60228
NC_017160:1628500:164591816459181646250333Yersinia pestis D182038 chromosome, complete genomehypothetical protein9e-60228
NC_010508:1980689:199691219969121997364453Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencehypothetical protein4e-0960.1
NC_008268:442657:458487458487458969483Rhodococcus sp. RHA1, complete genomehypothetical protein2e-0754.7