Pre_GI: BLASTP Hits

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Query: NC_009665:1495473:1508157 Shewanella baltica OS185 chromosome, complete genome

Start: 1508157, End: 1508513, Length: 357

Host Lineage: Shewanella baltica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: A psychrophilic bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species is differentiated from other Shewanella spp. based on its ability to grow at 4 degrees C but not at 37, production of N-acetyl-beta-glucosaminidase, lack of chymotrypsin, and ability to use a variety of complex carbon compounds as carbon and energy sources.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016901:1527877:153977215397721540128357Shewanella baltica OS678 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA2e-63240
NC_009052:1394000:140539914053991405755357Shewanella baltica OS155, complete genomesigma 54 modulation protein/ribosomal protein S30EA2e-63240
NC_011149:2701916:272110327211032721441339Salmonella enterica subsp. enterica serovar Agona str. SL483,ribosomal subunit interface protein2e-24110
NC_003198:2703013:272354827235482723886339Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative sigma(54) modulation protein2e-24110
NC_011080:2789744:281019328101932810531339Salmonella enterica subsp. enterica serovar Newport str. SL254,ribosomal subunit interface protein2e-24110
NC_006905:2805877:282490528249052825243339Salmonella enterica subsp. enterica serovar Choleraesuis strribosome associated factor, stabilizes ribosomes against dissociation2e-24110
CP002516:1196000:119743011974301197771342Escherichia coli KO11, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-23107
CU928160:2785792:280422028042202804561342Escherichia coli IAI1 chromosome, complete genomecold shock protein associated with 30S ribosomal subunit3e-23107
CP002185:2889656:290808629080862908427342Escherichia coli W, complete genomecold shock protein associated with 30S ribosomal subunit3e-23107
NC_009648:3192483:321044032104403210769330Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranslation inhibitor protein RaiA4e-22103
NC_013850:1198134:119954911995491199884336Klebsiella variicola At-22 chromosome, complete genomeribosomal subunit interface protein4e-22103
NC_012917:3565268:356632635663263566664339Pectobacterium carotovorum subsp. carotovorum PC1, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-22103
NC_011184:597496:598790598790599143354Vibrio fischeri MJ11 chromosome I, complete sequenceribosomal subunit interface protein3e-1477
NC_009656:5185704:518931351893135189621309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-1065.5
NC_015731:990000:991506991506991835330Nitrosomonas sp. Is79A3 chromosome, complete genomesigma 54 modulation protein/30S ribosomal protein S30EA2e-0857.8
NC_014221:38000:434864348644058573Truepera radiovictrix DSM 17093 chromosome, complete genomeribosomal subunit interface protein4e-0650.1
NC_014650:376070:402434402434402985552Geobacillus sp. Y4.1MC1 chromosome, complete genomesigma 54 modulation protein/30S ribosomal protein S30EA8e-0649.3
NC_015660:391627:413815413815414366552Geobacillus thermoglucosidasius C56-YS93 chromosome, completesigma 54 modulation protein/30S ribosomal protein S30EA8e-0649.3