Pre_GI: BLASTP Hits

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Query: NC_009664:570768:570013 Kineococcus radiotolerans SRS30216, complete genome

Start: 570013, End: 570771, Length: 759

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010617:92000:102510102510103250741Kocuria rhizophila DC2201, complete genomehypothetical protein5e-49194
NC_016109:7631165:765330176533017654041741Kitasatospora setae KM-6054, complete genomeputative peptidase C26 family protein7e-34144
NC_011959:972798:985129985129985905777Thermomicrobium roseum DSM 5159, complete genomeprobable glutamine amidotransferase3e-30132
NC_002678:5060670:507139550713955072105711Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-28125
NC_015275:1480500:148778614877861488511726Clostridium lentocellum DSM 5427 chromosome, complete genomepeptidase C262e-26119
NC_015391:448833:452842452842453570729Carnobacterium sp. 17-4 chromosome, complete genomeputative glutamine amidotransferase-like protein1e-25117
NC_014330:195447:220052220052220768717Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative glutamine amidotransferase1e-25116
NC_014150:3085013:308831930883193089047729Brachyspira murdochii DSM 12563 chromosome, complete genomepeptidase C264e-25115
NC_019908:436000:437568437568438284717Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglutamine amidotransferase5e-25114
NC_018607:662697:665765665765666493729Brachyspira pilosicoli B2904 chromosome, complete genomeglutamine amidotransferase1e-24113
NC_019908:1225690:123919612391961239924729Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglutamine amidotransferase1e-24113
NC_018604:789575:792644792644793372729Brachyspira pilosicoli WesB complete genomeputative glutamine amidotransferase1e-24113
NC_014330:2026193:202926120292612029989729Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative glutamine amidotransferase1e-24113
NC_013504:1648551:165102516510251651750726Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein1e-24113
NC_014377:1897857:191965019196501920360711Thermosediminibacter oceani DSM 16646 chromosome, complete genomepeptidase C261e-24113
NC_002973:1846000:184601318460131846747735Listeria monocytogenes str. 4b F2365, complete genomeglutamine amidotransferase, class-I2e-24112
NC_008530:1775841:177584117758411776566726Lactobacillus gasseri ATCC 33323, complete genomePredicted glutamine amidotransferase2e-23109
NC_005362:1870620:187203818720381872763726Lactobacillus johnsonii NCC 533, complete genomehypothetical protein1e-23109
NC_018528:2034000:204420920442092044937729Lactobacillus helveticus R0052 chromosome, complete genomeglutamine amidotransferase1e-23109
NC_009484:464342:469992469992470786795Acidiphilium cryptum JF-5 chromosome, complete genomepeptidase C264e-23108
NC_015186:573289:578939578939579694756Acidiphilium multivorum AIU301, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase6e-23107
NC_014212:319815:322324322324323025702Meiothermus silvanus DSM 9946 chromosome, complete genomepeptidase C268e-23107
NC_021175:964224:967709967709968401693Streptococcus oligofermentans AS 1.3089, complete genomeglutamine amidotransferase, class I2e-22106
NC_015186:1698000:171095817109581711671714Acidiphilium multivorum AIU301, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase3e-22105
NC_009484:1627734:164069616406961641409714Acidiphilium cryptum JF-5 chromosome, complete genomepeptidase C264e-22105
NC_016048:3983500:399079339907933991542750Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-21103
NC_013216:3907497:390866439086643909377714Desulfotomaculum acetoxidans DSM 771, complete genomepeptidase C263e-21102
NC_014727:2010000:201141520114152012164750Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,glutamine amidotransferase5e-21101
NC_015172:1002872:100699710069971007710714Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomepeptidase C265e-21101
NC_015578:3011133:303219730321973032973777Treponema primitia ZAS-2 chromosome, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase7e-21100
NC_015859:1147537:116967811696781170430753Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein9e-21100
NC_017179:1239991:125711212571121257837726Clostridium difficile BI1, complete genomeputative glutamine amidotransferase1e-20100
NC_013315:1230214:124733412473341248059726Clostridium difficile CD196 chromosome, complete genomeglutamine amidotransferase1e-20100
NC_013316:1225797:124495112449511245676726Clostridium difficile R20291, complete genomeputative glutamine amidotransferase1e-20100
NC_014328:4387303:442473644247364425530795Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative glutamine amidotransferase3e-2099
NC_013440:1698047:170826317082631709042780Haliangium ochraceum DSM 14365, complete genomepeptidase C263e-2098.6
NC_014624:224213:236686236686237417732Eubacterium limosum KIST612 chromosome, complete genomeglutamine amidotransferase5e-2098.2
NC_014376:317312:335049335049335762714Clostridium saccharolyticum WM1 chromosome, complete genomepeptidase C263e-1995.5
NC_014623:659422:665443665443666225783Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepeptidase c26 family protein8e-1994.4
NC_010718:2385400:240411924041192405057939Natranaerobius thermophilus JW/NM-WN-LF, complete genomepeptidase C268e-1994
NC_008781:4178115:422463342246334225574942Polaromonas naphthalenivorans CJ2, complete genomepeptidase C261e-1893.6
NC_013209:2782500:278251127825112783242732Acetobacter pasteurianus IFO 3283-01, complete genomeglutamine amidotransferases-like3e-1892.4
NC_017100:2782303:278230327823032783034732Acetobacter pasteurianus IFO 3283-03, complete genomeglutamine amidotransferases-like3e-1892.4
NC_017108:2779303:277964027796402780371732Acetobacter pasteurianus IFO 3283-12, complete genomeglutamine amidotransferases-like3e-1892.4
NC_017111:2779321:277965827796582780389732Acetobacter pasteurianus IFO 3283-32, complete genomeglutamine amidotransferases-like3e-1892.4
NC_017121:2781000:278106027810602781791732Acetobacter pasteurianus IFO 3283-07, complete genomeglutamine amidotransferases-like3e-1892.4
NC_017125:2782283:278228327822832783014732Acetobacter pasteurianus IFO 3283-22, complete genomeglutamine amidotransferases-like3e-1892.4
NC_017146:2782325:278232527823252783056732Acetobacter pasteurianus IFO 3283-26, complete genomeglutamine amidotransferases-like3e-1892.4
NC_017150:2689920:269025726902572690988732Acetobacter pasteurianus IFO 3283-01-42C, complete genomeglutamine amidotransferases-like3e-1892.4
NC_016027:2047954:210812321081232108863741Gluconacetobacter xylinus NBRC 3288, complete genomeglutamine amidotransferase-like protein8e-1890.9
NC_013170:1020339:102551110255111026245735Cryptobacterium curtum DSM 15641, complete genomepredicted glutamine amidotransferase1e-1790.1
NC_008712:215499:217148217148217942795Arthrobacter aurescens TC1 plasmid TC1, complete sequenceputative glutamine amidotransferase2e-1789.7
NC_014363:1344768:135216813521681352872705Olsenella uli DSM 7084 chromosome, complete genomepeptidase C263e-1788.6
NC_014355:220002:220002220002220778777Candidatus Nitrospira defluvii, complete genomeputative gamma-glutamyl-gamma-aminobutyrate hydrolase8e-1787.4
NC_021150:4929670:494622049462204946972753Azotobacter vinelandii CA6, complete genomeglutamine amidotransferase2e-1685.9
NC_012560:4929683:494623349462334946985753Azotobacter vinelandii DJ, complete genomeglutamine amidotransferase2e-1685.9
NC_007645:3870466:389148238914823892183702Hahella chejuensis KCTC 2396, complete genomepredicted glutamine amidotransferase2e-1685.9
NC_012522:3224526:325091232509123251685774Rhodococcus opacus B4, complete genomepeptidase C26 family protein4e-1685.1
NC_016818:859181:881704881704882534831Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative glutamine amidotransferase2e-1582.8
NC_016048:3983500:399157139915713992308738Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein4e-1581.6
NC_015136:2282488:229828922982892299185897Burkholderia sp. CCGE1001 chromosome 1, complete sequencepeptidase C261e-1480.5
NC_009778:1141716:117102411710241171803780Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1479.7
NC_020260:1184174:121250512125051213284780Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-1479.7
NC_020064:1962172:199219619921961992957762Serratia marcescens FGI94, complete genomeputative glutamine amidotransferase9e-1477.4
NC_008391:2045348:206571020657102066615906Burkholderia cepacia AMMD chromosome 2, complete sequencepeptidase C261e-1377
NC_012724:2068588:2093358209335820943711014Burkholderia glumae BGR1 chromosome 1, complete genomePeptidase C262e-1376.3
NC_013722:2810721:282443028244302825290861Xanthomonas albilineans, complete genomeputative predicted glutamine amidotransferases protein3e-1375.9
NC_010625:1602191:162914216291421629969828Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencepeptidase C263e-1375.5
NC_014306:3210311:323079832307983231562765Erwinia billingiae Eb661, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase4e-1375.5
NC_013716:357928:389040389040389804765Citrobacter rodentium ICC168, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase4e-1375.1
NC_015677:3339181:334754333475433348349807Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein3e-1272.4
NC_017249:7993713:802981280298128030483672Bradyrhizobium japonicum USDA 6, complete genomeamidotransferase4e-1168.6
NC_014618:1809369:183382318338231834587765Enterobacter cloacae SCF1 chromosome, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase2e-1066.6
NC_014166:1008266:100761010076101008296687Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepeptidase C262e-1066.2
NC_007705:1388607:139994413999441400804861Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein4e-1065.1
NC_010627:532407:553322553322554146825Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencepeptidase C263e-0962.4
NC_013203:202008:2234352234352250241590Atopobium parvulum DSM 20469, complete genomeGMP synthase, large subunit3e-0755.5
NC_015977:2807782:2836172283617228377821611Roseburia hominis A2-183 chromosome, complete genomeGMP synthase7e-0754.3
NC_010001:312500:3297753297753312981524Clostridium phytofermentans ISDg, complete genomeGMP synthase, large subunit9e-0754.3
NC_015634:2779392:2795308279530827968611554Bacillus coagulans 2-6 chromosome, complete genomeGMP synthase, large subunit2e-0653.1
NC_016023:1658377:1665015166501516665681554Bacillus coagulans 36D1 chromosome, complete genomeGMP synthase large subunit3e-0652.4
NC_010655:854152:8738618738618753841524Akkermansia muciniphila ATCC BAA-835, complete genomeGMP synthase, large subunit9e-0650.8
NC_010814:3621215:364677636467763647417642Geobacter lovleyi SZ, complete genomepeptidase C269e-0650.8