Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4639475 Kineococcus radiotolerans SRS30216, complete genome

Start: 4639475, End: 4639918, Length: 444

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:3867439:387508438750843875518435Streptomyces fulvissimus DSM 40593, complete genomePentapeptide repeat protein5e-1889.7
NC_019757:4878417:4878417487841748815033087Cylindrospermum stagnale PCC 7417, complete genomeputative low-complexity protein4e-0960.1
NC_009380:336024:341384341384342175792Salinispora tropica CNB-440 chromosome, complete genomepentapeptide repeat-containing protein1e-0858.5
NC_014965:1428902:1503902150390215059712070Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein2e-0857.8
NC_009927:253250:2585362585362601431608Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencepentapeptide repeat protein2e-0857.8
NC_003552:2318374:2330272233027223319541683Methanosarcina acetivorans C2A, complete genomehypothetical protein4e-0856.6
NC_016626:1781956:1794926179492617971812256Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein2e-0754.7
NC_002939:2617037:263988126398812640645765Geobacter sulfurreducens PCA, complete genomepentapeptide repeat domain protein4e-0753.9
NC_009654:615504:6289616289616301211161Marinomonas sp. MWYL1, complete genomepentapeptide repeat-containing protein4e-0753.5
NC_008312:409830:4178494178494209503102Trichodesmium erythraeum IMS101, complete genomepentapeptide repeat6e-0752.8
NC_020126:7015976:7023392702339270285575166Myxococcus stipitatus DSM 14675, complete genomehypothetical protein1e-0652.4
NC_009925:5737000:573826157382615739160900Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein9e-0752.4
NC_003155:5005913:500990350099035010520618Streptomyces avermitilis MA-4680, complete genomehypothetical protein9e-0752.4
NC_007759:512477:5167495167495180741326Syntrophus aciditrophicus SB, complete genomepentapeptide repeat protein1e-0652
NC_011094:2791719:2833929283392928350291101Salmonella enterica subsp. enterica serovar Schwarzengrund streffector protein pipB21e-0652
NC_007775:1153631:117359511735951174071477Synechococcus sp. JA-3-3Ab, complete genomepentapeptide repeat family protein2e-0651.6
NC_007626:1038214:1060439106043910620671629Magnetospirillum magneticum AMB-1, complete genomeUncharacterized low-complexity protein2e-0651.2
NC_006905:2857699:2881486288148628825381053Salmonella enterica subsp. enterica serovar Choleraesuis strHomolog of pipB, putative pentapeptide repeats (8 copies)2e-0651.2
NC_012125:2826624:2862018286201828631301113Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0651.2
NC_010102:2881714:2890943289094328920431101Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0650.8
NC_011083:2847318:2901312290131229024121101Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,effector protein pipB23e-0650.8
NC_009380:4944183:495421449542144954903690Salinispora tropica CNB-440 chromosome, complete genomepentapeptide repeat-containing protein3e-0650.8
NC_007413:868678:869853869853870311459Anabaena variabilis ATCC 29413, complete genomePentapeptide repeat3e-0650.8
NC_015711:7471500:7489949748994974909561008Myxococcus fulvus HW-1 chromosome, complete genomepentapeptide repeat-containing protein3e-0650.4
NC_003272:5040500:505640450564045056862459Nostoc sp. PCC 7120, complete genomehypothetical protein3e-0650.4
NC_013204:929434:9366239366239395382916Eggerthella lenta DSM 2243, complete genomepentapeptide repeat protein4e-0650.1
NC_016832:2743801:2753022275302227541071086Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein pipB25e-0650.1
NC_004631:2755306:2765723276572327667751053Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-0650.1
NC_003198:2769449:2779866277986627809181053Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-0650.1
NC_015711:3546500:3552250355225035552012952Myxococcus fulvus HW-1 chromosome, complete genomepentapeptide repeat-containing protein6e-0649.7
NC_014834:3130715:317497831749783175799822Rhodopseudomonas palustris DX-1 chromosome, complete genomepentapeptide repeat-containing protein6e-0649.7
NC_016831:2779864:2789091278909127901911101Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-0649.3
NC_011080:2897977:2903442290344229045421101Salmonella enterica subsp. enterica serovar Newport str. SL254,effector protein pipB28e-0649.3
NC_019748:1846500:185079818507981851457660Stanieria cyanosphaera PCC 7437, complete genomepentapeptide repeat protein8e-0649.3
NC_007517:2926792:293976729397672940255489Geobacter metallireducens GS-15, complete genomePentapeptide repeat protein7e-0649.3
NC_011294:2802502:2811728281172828127801053Salmonella enterica subsp. enterica serovar Enteritidis strexported protein1e-0548.9
NC_003197:2894344:2926802292680229278541053Salmonella typhimurium LT2, complete genomesecreted effector protein1e-0548.9
NC_016810:2943912:2949378294937829504301053Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-0548.9
NC_016856:2896630:2947037294703729480891053Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein1e-0548.9
NC_016860:2917910:2950368295036829514201053Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein1e-0548.9
NC_016857:2943912:2949378294937829504901113Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74effector protein pipB29e-0648.9
NC_017046:2943929:2948119294811929492311113Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-0648.9
NC_009925:5737000:573763457376345738257624Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein9e-0648.9
NC_011205:2962270:2971495297149529725951101Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853effector protein pipB29e-0648.9
NC_016863:2844883:2895290289529028963421053Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein9e-0648.9
NC_011894:7563668:7589150758915075903251176Methylobacterium nodulans ORS 2060, complete genomepentapeptide repeat protein9e-0648.9
NC_016816:1852659:1855196185519618562661071Pantoea ananatis LMG 5342, complete genomepentapeptide repeat-containing protein1e-0548.9