Pre_GI: BLASTP Hits

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Query: NC_009664:3969609:3972866 Kineococcus radiotolerans SRS30216, complete genome

Start: 3972866, End: 3973972, Length: 1107

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013521:1976331:1977666197766619788531188Sanguibacter keddieii DSM 10542, complete genomepredicted periplasmic solute-binding protein9e-41167
NC_013169:1290000:1290007129000712911131107Kytococcus sedentarius DSM 20547, complete genomepredicted periplasmic solute-binding protein7e-39161
NC_014210:3671495:3671495367149536728651371Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,aminodeoxychorismate lyase7e-39161
NC_013521:1976331:1976331197633119774971167Sanguibacter keddieii DSM 10542, complete genomepredicted periplasmic solute-binding protein4e-32139
NC_014624:3463272:3485115348511534865961482Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-29129
NC_008593:1461771:1464307146430714653171011Clostridium novyi NT, complete genomehypothetical protein2e-26120
NC_019978:2036779:2057857205785720588611005Halobacteroides halobius DSM 5150, complete genomehypothetical protein5e-26118
NC_020272:1311932:1315749131574913168401092Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein6e-25115
NC_012803:1373500:1374453137445313757211269Micrococcus luteus NCTC 2665, complete genomepredicted periplasmic solute-binding protein3e-24113
NC_003485:316679:3356393356393372071569Streptococcus pyogenes MGAS8232, complete genomeputative aminodeoxychorismate lyase2e-24113
NC_014328:3682000:369800436980043698822819Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein3e-24112
NC_020995:2255521:2259450225945022607931344Enterococcus casseliflavus EC20, complete genomeaminodeoxychorismate lyase7e-24111
NC_016789:1334514:1379660137966013808081149Corynebacterium diphtheriae PW8 chromosome, complete genomeputative secreted protein2e-23110
NC_016785:1297208:1315435131543513165831149Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative secreted protein2e-23110
NC_016799:1343020:1389304138930413904521149Corynebacterium diphtheriae 31A chromosome, complete genomeputative secreted protein2e-23110
NC_016800:1344189:1362416136241613635641149Corynebacterium diphtheriae BH8 chromosome, complete genomeputative secreted protein2e-23110
NC_016801:1361597:1378980137898013801281149Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative secreted protein2e-23110
NC_002935:1315019:1360160136016013613081149Corynebacterium diphtheriae NCTC 13129, complete genomePutative secreted protein2e-23110
NC_016782:1316467:1333852133385213350001149Corynebacterium diphtheriae 241 chromosome, complete genomeputative secreted protein2e-23110
NC_016786:1316436:1333822133382213349701149Corynebacterium diphtheriae HC01 chromosome, complete genomeputative secreted protein2e-23110
NC_016788:1315877:1333263133326313344111149Corynebacterium diphtheriae HC04 chromosome, complete genomeputative secreted protein2e-23110
NC_016790:1259356:1300652130065213018001149Corynebacterium diphtheriae VA01 chromosome, complete genomeputative secreted protein2e-23110
NC_016802:1317365:1334751133475113358991149Corynebacterium diphtheriae HC02 chromosome, complete genomeputative secreted protein2e-23110
NC_014484:1163576:1167626116762611686691044Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein5e-23108
NC_018515:989616:1007270100727010082891020Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein5e-23108
NC_013894:117644:136689136689137654966Thermocrinis albus DSM 14484 chromosome, complete genomeaminodeoxychorismate lyase1e-22107
NC_011658:4171237:4181084418108441821541071Bacillus cereus AH187 chromosome, complete genomehypothetical protein6e-22105
NC_011969:4065460:4076444407644440774991056Bacillus cereus Q1 chromosome, complete genomeaminodeoxychorismate lyase5e-22105
NC_007530:4176462:4190306419030641913611056Bacillus anthracis str. 'Ames Ancestor', complete genomeconserved hypothetical protein tigr002474e-22105
NC_011126:163878:180577180577181521945Hydrogenobaculum sp. Y04AAS1, complete genomeaminodeoxychorismate lyase4e-22105
NC_014958:3346500:3366244336624433672661023Deinococcus maricopensis DSM 21211 chromosome, complete genomeaminodeoxychorismate lyase4e-22105
NC_017200:4191963:4201630420163042027001071Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein9e-22104
NC_014335:4113154:4121995412199541230651071Bacillus cereus biovar anthracis str. CI chromosome, completeaminodeoxychorismate lyase1e-21104
NC_005957:4169610:4179463417946341805331071Bacillus thuringiensis serovar konkukian str. 97-27, completeprobable aminodeoxychorismate lyase1e-21104
NC_010184:4219257:4226713422671342277831071Bacillus weihenstephanensis KBAB4, complete genomeaminodeoxychorismate lyase2e-21103
NC_020911:2793234:2814511281451128156861176Octadecabacter antarcticus 307, complete genomeaminodeoxychorismate lyase5e-21102
NC_011772:4321117:4328290432829043293601071Bacillus cereus G9842, complete genomehypothetical protein TIGR002476e-21102
NC_014150:582093:5906475906475916541008Brachyspira murdochii DSM 12563 chromosome, complete genomeaminodeoxychorismate lyase1e-20100
NC_014657:673500:6859626859626869691008Caldicellulosiruptor owensensis OL chromosome, complete genomeaminodeoxychorismate lyase1e-20100
NC_013939:1001974:1018049101804910190681020Deferribacter desulfuricans SSM1, complete genomeaminodeoxychorismate lyase7e-2098.6
NC_016513:317197:3188113188113198541044Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completepyrimidine regulatory protein PyrR2e-1997.4
NC_014330:952500:9695979695979706041008Brachyspira pilosicoli 95/1000 chromosome, complete genomeaminodeoxychorismate lyase2e-1997.4
NC_013416:16493:1649316493175361044Aggregatibacter actinomycetemcomitans D11S-1, complete genomepyrimidine regulatory protein PyrR2e-1997.1
NC_014844:2638994:2638994263899426400521059Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeaminodeoxychorismate lyase3e-1996.3
NC_006155:2893802:2911986291198629130111026Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein9e-1994.7
NC_010634:2810815:2828998282899828300231026Yersinia pseudotuberculosis PB1/+, complete genomeaminodeoxychorismate lyase9e-1994.7
NC_014554:1339566:1360534136053413617391206Lactobacillus plantarum subsp. plantarum ST-III chromosome,hypothetical protein2e-1893.6
NC_014034:1816000:1817324181732418184961173Rhodobacter capsulatus SB1003 chromosome, complete genomeaminodeoxychorismate lyase family protein3e-1893.2
NC_018604:305957:3083013083013093081008Brachyspira pilosicoli WesB complete genomeaminodeoxychorismate lyase3e-1892.8
NC_009077:4747922:4762792476279247639071116Mycobacterium sp. JLS, complete genomeaminodeoxychorismate lyase3e-1892.8
NC_009495:2685646:2692733269273326937641032Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein7e-1891.7
NC_016632:951500:961014961014961982969Serratia symbiotica str. 'Cinara cedri' chromosome, completeaminodeoxychorismate lyase9e-1891.3
NC_009699:2733529:2740695274069527417261032Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein1e-1790.9
NC_015563:3786192:3818400381840038194131014Delftia sp. Cs1-4 chromosome, complete genomeaminodeoxychorismate lyase3e-1789.7
NC_010673:703816:7526177526177536511035Borrelia hermsii DAH, complete genomehypothetical protein6e-1788.6
NC_008710:703740:7498597498597508931035Borrelia turicatae 91E135, complete genomehypothetical protein8e-1788.2
NC_011244:746801:7641397641397651731035Borrelia recurrentis A1, complete genomehypothetical protein2e-1686.7
NC_012115:1122905:113663511366351137555921Nautilia profundicola AmH, complete genomehypothetical protein4e-1685.9
NC_014722:1497244:1500896150089615020201125Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein8e-1685.1
NC_009662:837500:839976839976840935960Nitratiruptor sp. SB155-2, complete genomehypothetical protein2e-1584
NC_016112:2301023:231710723171072318099993Methylomicrobium alcaliphilum chromosome, complete genomeaminodeoxychorismate lyase2e-1583.6
NC_017075:2733898:275237327523732753335963Rubrivivax gelatinosus IL144, complete genomehypothetical protein4e-1582.8
NC_013730:1948484:1948484194848419495211038Spirosoma linguale DSM 74, complete genomeaminodeoxychorismate lyase8e-1581.6
NC_007484:1823751:1854815185481518558401026Nitrosococcus oceani ATCC 19707, complete genomeAminodeoxychorismate lyase1e-1480.9
NC_010278:1989500:2002014200201420030481035Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,periplasmic solute-binding protein5e-1479
NC_009053:2025782:2040329204032920413631035Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein5e-1479
NC_010939:2085000:2097486209748620985201035Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein1e-1377.8
NC_008687:45967:6487164871660491179Paracoccus denitrificans PD1222 chromosome 2, complete sequenceaminodeoxychorismate lyase1e-1377.8
NC_010551:2007926:2008546200854620095651020Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceaminodeoxychorismate lyase2e-1377
NC_008390:2018201:2018201201820120192201020Burkholderia cepacia AMMD chromosome 1, complete sequenceaminodeoxychorismate lyase2e-1377
NC_012559:2563922:256851625685162569514999Laribacter hongkongensis HLHK9, complete genomeAminodeoxychorismate lyase precursor4e-1375.9
NC_015501:1341661:1362771136277113638861116Porphyromonas asaccharolytica DSM 20707 chromosome, completeaminodeoxychorismate lyase5e-1375.5
NC_011565:469962:4908564908564919081053Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative 4-amino-4-deoxychorismate lyase6e-1375.5
NC_007760:1415663:1428322142832214293531032Anaeromyxobacter dehalogenans 2CP-C, complete genomeAminodeoxychorismate lyase2e-1170.1
NC_002947:2157648:2161050216105021623151266Pseudomonas putida KT2440, complete genomeconserved hypothetical protein TIGR002475e-1168.9
NC_011891:3004000:3006363300636330073941032Anaeromyxobacter dehalogenans 2CP-1, complete genomeaminodeoxychorismate lyase5e-1168.9
NC_007645:2181739:2197283219728321983111029Hahella chejuensis KCTC 2396, complete genomepredicted periplasmic solute-binding protein9e-1168.2
NC_020125:1237536:1259621125962112606461026Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein4e-1065.9