Pre_GI: BLASTP Hits

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Query: NC_009656:6224221:6241571 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 6241571, End: 6243214, Length: 1644

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1885613:1908432190843219101171686Pseudomonas putida ND6 chromosome, complete genomerestriction modification system DNA specificity subunit4e-118425
NC_002947:5386489:5396987539698753987171731Pseudomonas putida KT2440, complete genometype I restriction-modification system, S subunit3e-93343
NC_014394:3114648:3132320313232031340411722Gallionella capsiferriformans ES-2 chromosome, complete genomerestriction modification system DNA specificity domain1e-89330
NC_014306:4376012:4402909440290944046391731Erwinia billingiae Eb661, complete genomeType I restriction-modification system, S subunit5e-87322
NC_009665:2352528:2352528235252823543781851Shewanella baltica OS185 chromosome, complete genomerestriction modification system DNA specificity subunit7e-83308
NC_009943:940835:9510329510329527651734Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain6e-81301
NC_010468:4059436:4070347407034740721041758Escherichia coli ATCC 8739, complete genomerestriction modification system DNA specificity domain4e-80299
NC_016745:1548426:1556423155642315582191797Oceanimonas sp. GK1 chromosome, complete genometype I restriction-modification system specificity4e-77289
NC_010337:616304:6289866289866306021617Heliobacterium modesticaldum Ice1, complete genometype i restriction modification DNA specificity domain5e-74279
NC_010995:764567:7715967715967739832388Cellvibrio japonicus Ueda107, complete genometype I restriction-modification system, S subunit4e-67256
NC_010170:4196197:4209964420996442123572394Bordetella petrii, complete genometype I restriction-modification system, S subunit3e-66253
NC_015633:2801321:2804068280406828058431776Vibrio anguillarum 775 chromosome chromosome I, complete sequencetype I restriction-modification system specificity2e-63243
NC_008639:1573971:1587158158715815888311674Chlorobium phaeobacteroides DSM 266, complete genomerestriction modification system DNA specificity domain4e-61236
NC_011899:2165814:2178735217873521804321698Halothermothrix orenii H 168, complete genomerestriction modification system DNA specificity domain protein7e-58225
NC_004603:370320:3874733874733892241752Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative HsdS polypeptide, part of CfrA family1e-54214
NC_014965:997344:1006320100632010080921773Vibrio vulnificus MO6-24/O chromosome I, complete sequencetype I restriction-modification system, DNA-methyltransferase subunit M6e-54212
NC_020541:2551539:2562003256200325637091707Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit2e-49197
NC_014034:1418681:1425744142574414274261683Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIIIP subunit S8e-49195
NC_015677:1282865:1291978129197812937441767Ramlibacter tataouinensis TTB310 chromosome, complete genometype I restriction- modification, DNA specificity subunit1e-47191
NC_011884:1029328:1038008103800810397261719Cyanothece sp. PCC 7425, complete genomerestriction modification system DNA specificity domain protein1e-44181
NC_009925:2240871:2242037224203722437581722Acaryochloris marina MBIC11017, complete genometype I restriction-modification system S subunit5e-43176
NC_009434:695582:7172977172977187151419Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit4e-39163
NC_016612:2009927:2018525201852520200031479Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system subunit S2e-38160
NC_014216:3003347:3007974300797430119703997Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein3e-37156
NC_014479:700281:7099167099167112171302Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeType I restriction modification system DNA specificity domain protein (HsdS)4e-37156
NC_011145:1732499:1741930174193017430241095Anaeromyxobacter sp. K, complete genomerestriction modification system DNA specificity domain2e-34147
NC_014727:368698:3798813798813812961416Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type i site-specific deoxyribonuclease chain s3e-34146
NC_014363:1902868:1912983191298319145601578Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-33145
NC_016514:506611:5236505236505248611212Enterobacter cloacae EcWSU1 chromosome, complete genometype-1 restriction enzyme specificity protein3e-33143
NC_014034:1036652:1048875104887510505001626Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIP subunit S2e-30134
NC_009715:1470419:1483709148370914852951587Campylobacter curvus 525.92 chromosome, complete genomeputative type I restriction-modification system, S subunit5e-30132
NC_015873:63487:6196561965634941530Megasphaera elsdenii DSM 20460, complete genomerestriction modification system DNA specificity domain protein9e-30132
NC_016610:2077603:2094664209466420960731410Tannerella forsythia ATCC 43037 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein7e-29129
NC_009053:313779:3204273204273215211095Actinobacillus pleuropneumoniae L20, complete genomeputative Type I restriction enzyme EcoR124II specificity protein1e-28128
NC_011662:1:7271727184071137Thauera sp. MZ1T, complete genomerestriction modification system DNA specificity domain protein2e-27124
NC_011831:2213306:2212048221204822133191272Chloroflexus aggregans DSM 9485, complete genomerestriction modification system DNA specificity domain protein2e-27124
NC_018748:1443176:1444217144421714455061290Emticicia oligotrophica DSM 17448 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-26119
NC_014655:130636:1415751415751430621488Leadbetterella byssophila DSM 17132 chromosome, complete genomerestriction modification system DNA specificity domain8e-26119
NC_014011:472650:4809384809384821071170Aminobacterium colombiense DSM 12261 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-25117
NC_018867:1407163:1443303144330314445141212Dehalobacter sp. CF chromosome, complete genomeType I restriction-modification system, specificity subunit S1e-24114
NC_016612:2009927:2027292202729220288781587Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system RcaSBIP subunit S2e-23111
NC_014363:1902868:191157019115701912100531Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-23111
NC_018528:697553:696817696817697560744Lactobacillus helveticus R0052 chromosome, complete genomerestriction modification system DNA specificity subunit1e-22108
NC_015571:2002489:2035156203515620365861431Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system2e-22108
NC_015500:2866027:2878192287819228801321941Treponema brennaborense DSM 12168 chromosome, complete genomeprotein of unknown function DUF455e-22106
NC_015571:2002489:2036581203658120381431563Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system, subunit S1e-20101
NC_015565:2408669:2416907241690724181391233Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completerestriction modification system DNA specificity domain-containing protein2e-20100
NC_015320:1690047:1699124169912417003861263Archaeoglobus veneficus SNP6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1998.6
NC_010814:1441327:1458977145897714603201344Geobacter lovleyi SZ, complete genomerestriction modification system DNA specificity domain1e-1998.6
NC_004369:2465461:2475395247539524765521158Corynebacterium efficiens YS-314, complete genomeputative type I restriction-modification system subunit S3e-1997.1
NC_011144:1073944:1085756108575610872191464Phenylobacterium zucineum HLK1, complete genometype I restriction-modification system, S subunit8e-1995.5
NC_014363:1902868:1910148191014819115841437Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-1894.4
NC_019964:2816990:2836848283684828381791332Halovivax ruber XH-70, complete genomerestriction endonuclease S subunit3e-1790.5
NC_014216:3003347:300606530060653006445381Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity subunit9e-1789
NC_003228:1732497:1732497173249717338401344Bacteroides fragilis NCTC 9343, complete genomeputative type I restriction enzyme specificity protein1e-1585.1
NC_013199:845000:8452258452258464061182Lactobacillus rhamnosus Lc 705, complete genometype I restriction modification system DNA specificity domain, enzyme S protein (hsdS)4e-1583.6
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant5e-1583.2
NC_008340:2034810:2045005204500520462641260Alkalilimnicola ehrlichei MLHE-1, complete genomerestriction modification system DNA specificity domain8e-1582.4
NC_013730:3729626:3747015374701537485771563Spirosoma linguale DSM 74, complete genomerestriction modification system DNA specificity domain protein1e-1481.6
NC_016838:85487:9616296162973581197Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,Restriction modification system DNA specificity domain protein4e-1480.1
NC_007778:3470661:3484682348468234859171236Rhodopseudomonas palustris HaA2, complete genomeRestriction modification system DNA specificity domain5e-1479.7
NC_012491:743883:7529087529087541431236Brevibacillus brevis NBRC 100599, complete genomeputative type I restriction modification system specificity protein1e-1378.2
NC_015703:3880903:3901289390128939026681380Runella slithyformis DSM 19594 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1377.4
NC_011832:913994:9247349247349261491416Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein4e-1376.6
NC_009429:401500:422289422289422549261Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completeType I restriction-modification system methyltransferase subunit-like protein6e-1376.3
NC_015761:299386:3115343115343127541221Salmonella bongori NCTC 12419, complete genometype I restriction-modification methylase2e-1274.7
NC_010175:2488000:2494129249412924954451317Chloroflexus aurantiacus J-10-fl, complete genomerestriction modification system DNA specificity domain6e-1272.8
NC_009715:1470419:148190214819021482873972Campylobacter curvus 525.92 chromosome, complete genometype I restriction-modification system S subunit2e-1171.6
NC_015660:3174424:3182135318213531835531419Geobacillus thermoglucosidasius C56-YS93 chromosome, completerestriction modification system DNA specificity domain-containing protein2e-1170.9
NC_010617:558954:5701515701515713471197Kocuria rhizophila DC2201, complete genometype I restriction enzyme S protein9e-1168.9
NC_014727:995480:1008566100856610097111146Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,restriction endonuclease s subunits-like protein1e-1068.6
NC_018721:943801:9501419501419514091269Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, specificity subunit HdsS1e-1068.2
NC_009712:1008000:1014213101421310155861374Candidatus Methanoregula boonei 6A8, complete genomerestriction modification system DNA specificity subunit4e-1066.6
NC_017033:678321:6856856856856869081224Frateuria aurantia DSM 6220 chromosome, complete genomerestriction endonuclease S subunit7e-1065.9
NC_008789:1237969:1256434125643412577231290Halorhodospira halophila SL1, complete genomerestriction modification system DNA specificity domain7e-1065.9
NC_016023:1959255:1968791196879119699301140Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein2e-0964.3
NC_009051:1074993:1084146108414610853301185Methanoculleus marisnigri JR1, complete genomerestriction modification system DNA specificity domain7e-0962.8
NC_014973:3452100:3487751348775134891301380Geobacter sp. M18 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0861.2
NC_019902:1863162:1874009187400918753281320Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, specificity subunit S3e-0860.8
NC_007404:2743877:2758249275824927594511203Thiobacillus denitrificans ATCC 25259, complete genomeputative restriction endonuclease S subunit2e-0860.8
NC_019978:1066000:1070757107075710721091353Halobacteroides halobius DSM 5150, complete genomerestriction endonuclease S subunit2e-0860.8
NC_014098:3008951:302965330296533030273621Bacillus tusciae DSM 2912 chromosome, complete genomerestriction endonuclease S subunits4e-0860.5
NC_007759:2097734:2114849211484921160631215Syntrophus aciditrophicus SB, complete genometype I restriction-modification system specificity subunit2e-0757.8
NC_010939:321492:3299713299713311371167Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative Type I restriction enzyme EcoR124II specificity protein2e-0757.8
NC_008271:140846:1461601461601473351176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencetype I restriction-modification system specificity subunit3e-0757.4
NC_016610:2077603:2097765209776520989701206Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein5e-0756.6
NC_014206:2807879:2818599281859928200561458Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-0756.6
NC_015136:2021799:2033188203318820345191332Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein6e-0756.2
NC_011146:3720658:3737851373785137392151365Geobacter bemidjiensis Bem, complete genomehypothetical protein7e-0756.2
NC_009338:817854:8285608285608296661107Mycobacterium gilvum PYR-GCK chromosome, complete genomerestriction modification system DNA specificity subunit1e-0655.5
NC_009974:53865:6261262612638681257Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completerestriction modification system DNA specificity subunit2e-0654.3