Pre_GI: BLASTP Hits

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Query: NC_009656:2422083:2434034 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 2434034, End: 2434885, Length: 852

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:4293252:429936842993684300237870Pseudomonas putida KT2440, complete genomerepressor protein-related protein2e-39163
NC_009512:2238437:225511622551162255985870Pseudomonas putida F1, complete genomeputative phage repressor3e-39162
NC_017986:4885979:490546349054634906305843Pseudomonas putida ND6 chromosome, complete genomeprophage PSPPH03, Cro/CI family transcriptional regulator6e-37154
NC_010322:1336231:134720713472071347911705Pseudomonas putida GB-1 chromosome, complete genomeputative phage repressor6e-1891.3
NC_015733:1943385:195415219541521954856705Pseudomonas putida S16 chromosome, complete genomeputative phage repressor2e-1789.7
NC_010473:1493983:150718515071851507661477Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted DNA-binding transcriptional regulator2e-1272.8
NC_000913:1404000:141778914177891418265477Escherichia coli K12, complete genomeRac prophage; predicted DNA-binding transcriptional regulator2e-1272.8
AC_000091:1407693:142147914214791421955477Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator2e-1272.8
NC_012759:1296000:130984813098481310324477Escherichia coli BW2952 chromosome, complete genomeRac prophage; putative DNA-binding transcriptional regulator2e-1272.8
NC_009256:1253384:126083512608351261551717Burkholderia vietnamiensis G4 chromosome 1, complete sequenceputative phage repressor2e-1169.7
NC_014121:2745097:275440527544052755277873Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative repressor protein3e-1168.9
NC_017033:2081206:209160520916052092288684Frateuria aurantia DSM 6220 chromosome, complete genomeputative transcriptional regulator1e-1067
NC_015563:4583906:459614345961434596862720Delftia sp. Cs1-4 chromosome, complete genomeputative phage repressor9e-1064.3
NC_011740:2769961:278688227868822787610729Escherichia fergusonii ATCC 35469, complete genomeRegulatory protein CI from bacteriophage origin2e-0963.5
NC_011353:2957962:297528529752852975899615Escherichia coli O157:H7 str. EC4115 chromosome, complete genomerepressor protein2e-0963.5
NC_013008:2910567:293015629301562930770615Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage-related repressor protein2e-0963.5
NC_013941:699286:703945703945704559615Escherichia coli O55:H7 str. CB9615 chromosome, complete genomerepressor protein2e-0963.5
NC_011415:600375:616589616589617281693Escherichia coli SE11 chromosome, complete genomephage transcriptional regulator1e-0963.5
CU928145:824367:827354827354828109756Escherichia coli 55989 chromosome, complete genomeRegulatory protein CI from bacteriophage origin2e-0963.2
NC_011751:643976:651596651596652351756Escherichia coli UMN026 chromosome, complete genomeregulatory protein CI from bacteriophage origin2e-0963.2
NC_011748:824367:827354827354828109756Escherichia coli 55989, complete genomeRegulatory protein CI from bacteriophage origin2e-0963.2
NC_016860:364981:379270379270379959690Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional activator-regulatory protein4e-0962
NC_011147:2496808:251241325124132513102690Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional activator-regulatory protein4e-0962
NC_006511:2501500:251687725168772517566690Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtranscriptional activator-regulatory protein4e-0962
NC_009832:2211154:223063522306352231279645Serratia proteamaculans 568, complete genomeputative phage repressor2e-0860.1
NC_010682:2422500:243745924374592438367909Ralstonia pickettii 12J chromosome 1, complete sequenceputative phage repressor3e-0859.3
NC_014166:1077121:108198310819831082630648Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeputative phage repressor1e-0757
NC_015663:4522109:453774545377454538440696Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage repressor protein CI2e-0756.6
NC_020063:2565605:258390425839042584608705Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator7e-0754.7
NC_016845:1285435:129456012945601294928369Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,regulatory protein CI bacteriophage origin1e-0653.9
NC_008752:3955327:395989139598913960568678Acidovorax avenae subsp. citrulli AAC00-1, complete genomeputative phage repressor2e-0653.5
NC_017060:59500:102616102616103311696Rahnella aquatilis HX2 plasmid PRA1, complete sequencephage repressor protein2e-0653.5
NC_013282:1200993:121435412143541214710357Cronobacter turicensis, complete genome26 kDa repressor protein2e-0653.1