Pre_GI: BLASTP Hits

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Query: NC_009565:2806000:2820596 Mycobacterium tuberculosis F11, complete genome

Start: 2820596, End: 2821348, Length: 753

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (genotype F11) represents the largest portion of isolates recovered from tuberculosis patients during a TB epidemic in the Western Cape of South Africa. Causative agent of tuberculosis. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:2786000:280091128009112801663753Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-147522
NC_009525:2802987:281924628192462819998753Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-147522
NC_000962:2791019:280727828072782808030753Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein1e-147522
NC_002755:2788000:280276628027662803518753Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein1e-147522
NC_012207:2747599:276384727638472764599753Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein9e-147519
NC_008769:2754828:277107427710742771826753Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein9e-147519
NC_002945:2757821:277407527740752774827753Mycobacterium bovis AF2122/97, complete genomehypothetical protein9e-147519
NC_016804:2735897:275043927504392751191753Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein9e-147519
NC_015848:2859145:287533928753392876091753Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein2e-145514
NC_019950:2830682:284687628468762847628753Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein2e-145514