Pre_GI: BLASTP Hits

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Query: NC_009525:2802987:2820278 Mycobacterium tuberculosis H37Ra, complete genome

Start: 2820278, End: 2820703, Length: 426

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (H37Ra; ATCC 25177) is an avirulent strain derived from its virulent parent strain H37 (isolated from a 19 year-old male patient with chronic pulmonary tuberculosis by Edward R. Baldwin in 1905). Causative agent of tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:2786000:280194328019432802368426Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein6e-55212
NC_015848:2859145:287637128763712876796426Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein6e-55212
NC_000962:2791019:280831028083102808735426Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein6e-55212
NC_012207:2747599:276487927648792765304426Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein6e-55212
NC_002945:2757821:277510727751072775532426Mycobacterium bovis AF2122/97, complete genomehypothetical protein6e-55212
NC_008769:2754828:277210627721062772531426Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein6e-55212
NC_009565:2806000:282162828216282822053426Mycobacterium tuberculosis F11, complete genomehypothetical protein6e-55212
NC_019950:2830682:284790828479082848333426Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein6e-55212
NC_016804:2735897:275147127514712751896426Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein6e-55212
NC_002755:2788000:280379828037982804223426Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein9e-55211
NC_008782:3167440:319454231945423194970429Acidovorax sp. JS42, complete genomePIN domain family protein6e-1476.3
NC_015635:5511994:551795355179535518399447Microlunatus phosphovorus NM-1, complete genomehypothetical protein2e-1064.7
NC_008319:136863:142873142873143319447Synechococcus sp. CC9311, complete genomeMycobacterium tuberculosis PIN domain family subfamily2e-0754.7
NC_013169:2581500:258682725868272587270444Kytococcus sedentarius DSM 20547, complete genomepredicted nucleic acid-binding protein, contains PIN domain2e-0754.7