Pre_GI: BLASTP Hits

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Query: NC_009512:3282500:3298935 Pseudomonas putida F1, complete genome

Start: 3298935, End: 3299195, Length: 261

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2575000:2597899259789925994341536Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family1e-21101
NC_015379:908904:9623749623749639091536Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family1e-21101
NC_012660:2684981:2697009269700926985381530Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transposase4e-1476.6
NC_012660:2045398:2082870208287020844171548Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transposase3e-1373.9
NC_007005:830467:848030848030848569540Pseudomonas syringae pv. syringae B728a, complete genome3e-1373.9
NC_016830:5994494:6011049601104960126531605Pseudomonas fluorescens F113 chromosome, complete genomeprotein TnpC58e-1372.4
NC_016830:2642881:2649127264912726507221596Pseudomonas fluorescens F113 chromosome, complete genomeprotein TnpC37e-1372.4
NC_016830:3869572:3920434392043439220291596Pseudomonas fluorescens F113 chromosome, complete genometransposase orf37e-1372.4
NC_016830:952342:9626919626919642861596Pseudomonas fluorescens F113 chromosome, complete genometransposase7e-1372.4
NC_020209:397376:4306364306364321621527Pseudomonas poae RE*1-1-14, complete genometransposase orf38e-1268.9
NC_012660:5793200:5826185582618558277111527Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transposase2e-1167.8
NC_018691:1822731:1848848184884818504251578Alcanivorax dieselolei B5 chromosome, complete genomeTransposase-like protein6e-1166.2
NC_018691:3525430:3540832354083235424091578Alcanivorax dieselolei B5 chromosome, complete genomeTransposase-like protein6e-1166.2
NC_018691:1322389:1335137133513713367141578Alcanivorax dieselolei B5 chromosome, complete genomeTransposase-like protein6e-1166.2
NC_015733:3736104:3756874375687437584211548Pseudomonas putida S16 chromosome, complete genomeISPpu14, transposase Orf31e-1065.1
NC_015379:4630367:4644408464440846460571650Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family6e-1062.8
NC_002947:4994335:5033959503395950354941536Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf31e-0858.5
NC_002947:4484824:4487111448711144886461536Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf31e-0858.5
NC_002947:6152500:6152929615292961544641536Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf33e-0857.4
NC_002947:4994335:5036907503690750384421536Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf33e-0857.4
NC_008463:5246954:5301889530188953034241536Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transposase1e-0755.5
NC_010501:30000:4031340313418481536Pseudomonas putida W619, complete genometransposase IS665e-0753.1
NC_007951:2233676:2242102224210222437241623Burkholderia xenovorans LB400 chromosome 1, complete sequenceTransposase ISPpu14 orf3 like, IS66 family7e-0752.8
NC_007951:740500:7548817548817565031623Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase7e-0752.8
NC_007952:1293024:1306890130689013085121623Burkholderia xenovorans LB400 chromosome 2, complete sequenceTransposase IS66 family7e-0752.8
NC_017986:4885979:4901735490173549032701536Pseudomonas putida ND6 chromosome, complete genometransposase IS661e-0652
NC_017986:2548720:2564881256488125664161536Pseudomonas putida ND6 chromosome, complete genometransposase IS661e-0652
NC_014910:1591003:1595522159552215970361515Alicycliphilus denitrificans BC chromosome, complete genometransposase is666e-0649.7
NC_014910:1912552:1928787192878719303011515Alicycliphilus denitrificans BC chromosome, complete genometransposase is666e-0649.7
NC_015422:3184823:3196333319633331978471515Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS666e-0649.7
NC_015458:2998000:3002485300248530040891605Pusillimonas sp. T7-7 chromosome, complete genometransposase6e-0649.7