Pre_GI: BLASTP Hits

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Query: NC_009439:3394174:3394174 Pseudomonas mendocina ymp, complete genome

Start: 3394174, End: 3394986, Length: 813

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:4280401:428040142804014281204804Pseudomonas aeruginosa DK2 chromosome, complete genomerRNA methyltransferase2e-98358
NC_008463:4389721:438972143897214390524804Pseudomonas aeruginosa UCBPP-PA14, complete genomerRNA methyltransferase2e-98358
NC_002516:1236644:125848812584881259291804Pseudomonas aeruginosa PAO1, complete genomerRNA methyltransferase3e-98358
NC_014965:997344:999046999046999870825Vibrio vulnificus MO6-24/O chromosome I, complete sequencerRNA (guanine-N1-)-methyltransferase3e-46185
NC_018868:973379:996605996605997426822Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeRibosomal RNA large subunit methyltransferase A (rRNA (guanine-N(1)-)-methyltransferase) (23S rRNA m1G745 methyltransferase)1e-43177
NC_012880:2399205:240556124055612406385825Dickeya dadantii Ech703, complete genomerRNA (guanine-N(1)-)-methyltransferase9e-43173
NC_010159:1710268:171570617157061716545840Yersinia pestis Angola, complete genomeribosomal RNA large subunit methyltransferase A4e-42171
NC_003143:1973867:199093919909391991778840Yersinia pestis CO92, complete genomerRNA (guanine-N1-)-methyltransferase4e-42171
NC_008149:2652825:265826426582642659103840Yersinia pestis Nepal516, complete genomerRNA (guanine-N1-)-methyltransferase4e-42171
NC_008800:1942000:195957719595771960437861Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,23S rRNA methyltransferase A3e-42171
NC_008740:1484531:151150515115051512356852Marinobacter aquaeolei VT8, complete genomerRNA (guanine-N(1)-)-methyltransferase1e-40166
NC_016602:2586044:259334825933482594178831Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceribosomal RNA large subunit methyltransferase A4e-40164
NC_014532:722151:731994731994732857864Halomonas elongata DSM 2581, complete genomerRNA (guanine-N(1)-)-methyltransferase4e-39161
NC_010334:2131939:214905821490582149864807Shewanella halifaxensis HAW-EB4, complete genomerRNA (guanine-N(1)-)-methyltransferase7e-39160
NC_011662:535613:553471553471554355885Thauera sp. MZ1T, complete genomerRNA (guanine-N(1)-)-methyltransferase4e-37155
NC_016818:3148000:315227231522723153093822Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completemethylase involved in ubiquinone/menaquinone biosynthesis2e-36153
NC_007969:2885249:291844529184452919386942Psychrobacter cryohalolentis K5, complete genomerRNA (guanine-N(1)-)-methyltransferase4e-36151
NC_017047:3212000:321633732163373217158822Rahnella aquatilis HX2 chromosome, complete genome23S rRNA methyltransferase A2e-35149
NC_015061:3147691:315173531517353152556822Rahnella sp. Y9602 chromosome, complete genomerRNA (guanine-N(1)-)-methyltransferase2e-35149
NC_017506:1832443:185285318528531853638786Marinobacter adhaerens HP15 chromosome, complete genomerRNA (guanine-N1-)-methyltransferase A3e-34145
NC_004565:20256:303383033831174837Clostridium tetani E88 plasmid pE88, complete sequencerRNA (guanine-N1-) methyltransferase (Mycinamicin-resistance protein)5e-28124
NC_009328:1651812:165952016595201660395876Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeribosomal RNA large subunit methyltransferase A4e-27121
NC_020210:1704500:171133117113311712206876Geobacillus sp. GHH01, complete genomeputative ribosomal RNA methyltransferase5e-27121
NC_014377:961259:972265972265973128864Thermosediminibacter oceani DSM 16646 chromosome, complete genomerRNA (guanine-N(1)-)-methyltransferase1e-25117
NC_013510:3065000:307982030798203080659840Thermomonospora curvata DSM 43183, complete genomerRNA (guanine-N(1)-)-methyltransferase8e-23107
NC_003155:5443230:545641654564165457267852Streptomyces avermitilis MA-4680, complete genomerRNA methyltransferase1e-22107
NC_008527:2112137:211516821151682115989822Lactococcus lactis subsp. cremoris SK11, complete genomeSAM-dependent methyltransferase2e-22105
NC_009004:2207148:220860222086022209423822Lactococcus lactis subsp. cremoris MG1363, complete genomeputative rRNA (guanine-N1-)-methyltransferase4e-22105
NC_011837:2605409:261240826124082613301894Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-22104
NC_009706:2673906:268090526809052681798894Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-22104
NC_015581:1791658:180735418073541808286933Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomebiotin biosynthesis protein BioC9e-0754.3