Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2452266 Pseudomonas mendocina ymp, complete genome

Start: 2452266, End: 2453357, Length: 1092

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:2698572:2743587274358727446361050Pseudomonas mendocina NK-01 chromosome, complete genomecopper resistance B0691
NC_009434:3611738:3655353365535336565131161Pseudomonas stutzeri A1501, complete genomecopper resistance protein B2e-177622
NC_010322:1:1618616186173011116Pseudomonas putida GB-1 chromosome, complete genomecopper resistance B3e-156551
NC_009512:1:1540415404165191116Pseudomonas putida F1, complete genomecopper resistance B precursor3e-156551
NC_010501:1:1542415424165391116Pseudomonas putida W619, complete genomecopper resistance B precursor3e-156551
NC_002947:6123608:6130432613043261315411110Pseudomonas putida KT2440, complete genomecopper resistance protein B1e-155549
NC_015733:5955467:5962156596215659633011146Pseudomonas putida S16 chromosome, complete genomecopper resistance B9e-155546
NC_010501:5735656:5740438574043857415531116Pseudomonas putida W619, complete genomecopper resistance B precursor1e-154546
NC_015740:2692023:269964926996492700446798Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecopper resistance B7e-141500
NC_017986:3283433:329173032917303292665936Pseudomonas putida ND6 chromosome, complete genomecopper resistance B3e-137488
NC_007492:4310828:431254343125434313448906Pseudomonas fluorescens PfO-1, complete genomeCopper resistance B precursor5e-112404
NC_010943:2465976:2473305247330524745731269Stenotrophomonas maltophilia K279a, complete genomeputative copper resistance protein1e-102373
NC_011748:3958572:397247939724793973378900Escherichia coli 55989, complete genomeCopper resistance protein B precursor4e-87322
NC_009778:4188000:421678942167894217688900Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-87322
CU928145:3958572:397247939724793973378900Escherichia coli 55989 chromosome, complete genomeCopper resistance protein B precursor4e-87322
NC_018697:1343756:136837413683741369126753Cycloclasticus sp. P1 chromosome, complete genomeCopB-like protein2e-66253
NC_010682:1913941:1928081192808119293701290Ralstonia pickettii 12J chromosome 1, complete sequencecopper resistance B precursor7e-64244
NC_007404:1388049:140492114049211405787867Thiobacillus denitrificans ATCC 25259, complete genomeprobable copper resistance protein B3e-58225
NC_010170:4800000:484763348476334848457825Bordetella petrii, complete genomecopper resistance protein B precursor1e-56220
NC_009659:1923925:195376319537631954743981Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance protein B9e-54211
NC_014640:1179382:119176311917631192743981Achromobacter xylosoxidans A8 chromosome, complete genomecopper resistance protein B domain-containing protein1e-53210
NC_008782:1308007:131136913113691312349981Acidovorax sp. JS42, complete genomecopper resistance B precursor2e-53209
NC_014414:2491811:250670625067062507506801Parvularcula bermudensis HTCC2503 chromosome, complete genomecopper resistance protein B7e-53207
NC_009138:1518315:153919415391941540174981Herminiimonas arsenicoxydans, complete genomeCopper resistance protein B precursor like (partial)1e-52206
NC_009659:892272:896525896525897520996Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance protein B1e-48194
NC_018868:619113:633990633990634853864Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeputative copper resistance protein B2e-45183
NC_016026:1224129:124799912479991248781783Micavibrio aeruginosavorus ARL-13 chromosome, complete genomecopper resistance B family protein3e-45182
NC_012982:711122:743128743128743823696Hirschia baltica ATCC 49814, complete genomecopper resistance B precursor1e-43177
NC_014532:988351:997713997713998483771Halomonas elongata DSM 2581, complete genomecopper resistance B precursor4e-43175
NC_012483:1408500:143300514330051433748744Acidobacterium capsulatum ATCC 51196, complete genomeputative copper resistance protein B2e-42173
NC_012808:1920500:193697019369701937815846Methylobacterium extorquens AM1, complete genomeCopper resistance protein CopB precursor8e-42171
NC_012988:1280610:129696112969611297770810Methylobacterium extorquens DM4, complete genomecopper resistance protein CopB1e-38160
NC_012808:1979000:198264019826401983428789Methylobacterium extorquens AM1, complete genomeputative copper resistance protein CopB2e-37156
NC_009512:1:1684716847188622016Pseudomonas putida F1, complete genomecopper-resistance protein, CopA family5e-1065.9
NC_010322:1:1762917629195871959Pseudomonas putida GB-1 chromosome, complete genomeCopA family copper resistance protein6e-1065.5
NC_010501:1:1686716867188251959Pseudomonas putida W619, complete genomecopper-resistance protein, CopA family6e-1065.5
NC_015733:5955467:5959897595989759618341938Pseudomonas putida S16 chromosome, complete genomeCopA family copper resistance protein2e-0963.5
NC_017986:3283433:3292987329298732949661980Pseudomonas putida ND6 chromosome, complete genomeCopA family copper resistance protein3e-0963.2
NC_002947:6123608:6131833613183361338422010Pseudomonas putida KT2440, complete genomecopper resistance protein A1e-0860.8
NC_009727:766000:7796537796537820642412Coxiella burnetii Dugway 7E9-12, complete genomecopper-resistance protein, CopA family protein1e-0757.8