Pre_GI: BLASTP Hits

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Query: NC_009438:3019552:3037017 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 3037017, End: 3037616, Length: 600

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014924:725380:737530737530738132603Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IB (PSPase-like)1e-57222
NC_009439:3104000:311944131194413120046606Pseudomonas mendocina ymp, complete genomeHAD family hydrolase9e-47186
NC_011883:1182000:119076011907601191374615Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,HAD-superfamily hydrolase, subfamily IB (PSPase-like)1e-28126
NC_014033:2410331:2411618241161824128501233Prevotella ruminicola 23 chromosome, complete genomephosphoserine phosphatase SerB1e-1273.2
NC_015571:1065775:107453310745331075405873Porphyromonas gingivalis TDC60, complete genomeSerB family protein1e-1273.2
NC_004757:427483:477187477187478017831Nitrosomonas europaea ATCC 19718, complete genomepossible serB; phosphoserine phosphatase protein2e-1272
NC_008553:1809780:1830003183000318312051203Methanosaeta thermophila PT, complete genomephosphoserine phosphatase SerB1e-1066.2
NC_015216:2113556:2118251211825121200531803Methanobacterium sp. AL-21 chromosome, complete genomephosphoserine phosphatase SerB1e-0962.8
NC_021175:597968:597968597968598615648Streptococcus oligofermentans AS 1.3089, complete genomephosphoserine phosphatase2e-0962.4
NC_014150:3053859:305763330576333058253621Brachyspira murdochii DSM 12563 chromosome, complete genomephosphoserine phosphatase SerB2e-0962
NC_016932:1791868:1791868179186817931511284Corynebacterium pseudotuberculosis 316 chromosome, complete genomephosphoserine phosphatase5e-0961.2
NC_014804:341663:357069357069357659591Thermococcus barophilus MP chromosome, complete genomephosphoserine phosphatase2e-0858.5
NC_014935:1223817:126169312616931262343651Nitratifractor saLSUginis DSM 16511 chromosome, complete genomephosphoserine phosphatase3e-0858.5
NC_013158:200424:219581219581220213633Halorhabdus utahensis DSM 12940, complete genomephosphoserine phosphatase SerB7e-0857
NC_010816:2326453:235296623529662353688723Bifidobacterium longum DJO10A, complete genomePhosphoserine phosphatase8e-0857
NC_004307:2208591:223382022338202234572753Bifidobacterium longum NCC2705, complete genomeprobable phosphoserine phosphatase9e-0857
NC_017221:535000:561314561314562036723Bifidobacterium longum subsp. longum KACC 91563 chromosome,phosphoserine phosphatase1e-0756.6
NC_016043:471719:487978487978488742765Taylorella asinigenitalis MCE3 chromosome, complete genomephosphoserine phosphatase2e-0755.8
NC_016582:9664000:9681086968108696823421257Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative phosphoserine phosphatase2e-0755.5