Pre_GI: BLASTP Hits

Some Help

Query: NC_009381:1783886:1826356 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1826356, End: 1826432, Length: 77

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:3251196:32736903273690327376677Yersinia pestis Nepal516, complete genometRNA-Asp7e-0752.8
NC_004088:3382148:34046263404626340469974Yersinia pestis KIM, complete genometRNA-Asp3e-0650.8
CP002516:3863932:38824283882428388250477Escherichia coli KO11, complete genometRNA-Asp5e-0650.1
NC_009648:4656187:46685724668572466864877Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometRNA-Asp5e-0650.1
CP002516:3863932:38742043874204387428077Escherichia coli KO11, complete genometRNA-Asp5e-0650.1
CP002185:234719:23762323762323769977Escherichia coli W, complete genometRNA-Asp5e-0650.1
NC_016822:246715:24961924961924969577Shigella sonnei 53G, complete genometRNA-Asp5e-0650.1
NC_016902:3863932:38742043874204387428077Escherichia coli KO11FL chromosome, complete genometRNA-Asp5e-0650.1
NC_016902:3863932:38824283882428388250477Escherichia coli KO11FL chromosome, complete genometRNA-Asp5e-0650.1
NC_007645:2204066:22157182215718221579477Hahella chejuensis KCTC 2396, complete genometRNA-Asp6e-0649.7