Pre_GI: BLASTP Hits

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Query: NC_009381:1783886:1793127 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1793127, End: 1793306, Length: 180

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3063016:307108530710853071264180Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein7e-27119
NC_017168:2751027:275909627590962759275180Yersinia pestis A1122 chromosome, complete genomehypothetical protein7e-27119
NC_008150:2681327:269216526921652692344180Yersinia pestis Antiqua, complete genomehypothetical protein7e-27119
NC_010159:3779129:378793337879333788112180Yersinia pestis Angola, complete genomehypothetical protein7e-27119
NC_005810:2739878:275071127507112750890180Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein7e-27119
NC_008149:1317109:132794713279471328126180Yersinia pestis Nepal516, complete genomehypothetical protein7e-27119
NC_004088:1387276:139804813980481398227180Yersinia pestis KIM, complete genomehypothetical protein7e-27119
NC_009708:1284555:129356112935611293740180Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein6e-25112