Pre_GI: BLASTP Hits

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Query: NC_009338:5161886:5163739 Mycobacterium gilvum PYR-GCK chromosome, complete genome

Start: 5163739, End: 5164668, Length: 930

Host Lineage: Mycobacterium gilvum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. These organism are common in soil and freshwater. Mycobacterium gilvum PYR-GCK was isolated from river sediment, Grand Calumet River in Northwestern Indiana, USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013093:1411882:141263314126331413622990Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-61234
NC_007777:2964500:298966629896662990505840Frankia sp. CcI3, complete genomesigma-243e-41169
NC_012988:4353000:435999343599934360955963Methylobacterium extorquens DM4, complete genomeRNA polymerase sigma factor4e-37155
NC_009921:3384116:338747933874793388363885Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-34146
NC_009953:3552738:355452635545263555413888Salinispora arenicola CNS-205 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor3e-34145
NC_013947:1011899:103481410348141035695882Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily1e-33144
NC_011963:1979136:199767119976711998531861Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceRNA polymerase sigma factor SigJ7e-33141
NC_017904:2641270:266192226619222662830909Mycobacterium sp. MOTT36Y chromosome, complete genomeECF family RNA polymerase sigma factor1e-32140
NC_015312:1191633:120925612092561210143888Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-32140
NC_011891:4450031:447536544753654476306942Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-32138
NC_003888:6853107:686230768623076863275969Streptomyces coelicolor A3(2), complete genomesigma factor1e-31137
NC_016935:1365463:137867613786761379554879Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF family RNA polymerase sigma factor2e-31136
NC_015690:3941113:395186339518633952741879Paenibacillus mucilaginosus KNP414 chromosome, complete genomeECF family RNA polymerase sigma factor1e-30134
NC_013729:2157785:215778521577852158747963Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-30134
NC_013929:9038500:903995490399549040901948Streptomyces scabiei 87.22 chromosome, complete genomesigma factor1e-30134
NC_002944:2373873:239794423979442398834891Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-30133
NC_013510:5394432:542642554264255427285861Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-30133
NC_006361:498305:511298511298512179882Nocardia farcinica IFM 10152, complete genomeputative sigma factor1e-29130
NC_013729:1556922:157591315759131576869957Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-29130
NC_013947:2113941:214394221439422144847906Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily1e-28127
NC_016582:389729:408355408355409278924Streptomyces bingchenggensis BCW-1 chromosome, complete genomeECF subfamily RNA polymerase sigma factor1e-28127
NC_013595:4031947:403803340380334038914882Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-29127
NC_010515:1618093:162184016218401622727888Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-28126
NC_008543:2696377:271349727134972714384888Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily4e-28125
NC_008061:2548849:255260425526042553491888Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily4e-28125
NC_014211:174694:178206178206179093888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidRNA polymerase, sigma-24 subunit, ECF subfamily1e-27124
NC_015656:381554:400378400378400803426Frankia symbiont of Datisca glomerata chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-27123
NC_016109:3963189:396631339663133967236924Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor3e-27122
NC_020126:2216926:223261622326162233497882Myxococcus stipitatus DSM 14675, complete genomeECF family RNA polymerase sigma factor3e-27122
NC_013729:2813895:281389528138952814809915Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-26120
NC_018681:2985078:300081030008103001703894Nocardia brasiliensis ATCC 700358 chromosome, complete genomeputative Sigma factor, sigma 70 type, group 4 (ECF)3e-25115
NC_016582:389729:400537400537401454918Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRNA polymerase sigma factor8e-21101
NC_016935:4038265:405515440551544056110957Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-1375.9
NC_012988:4353000:436675543667554367414660Methylobacterium extorquens DM4, complete genome2e-1273.2
NC_012914:5225609:523278752327875233743957Paenibacillus sp. JDR-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1168.2
NC_013510:4319296:433794943379494338947999Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1064.7
NC_014666:4419693:4438717443871744400121296Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0963.2
NC_016582:389729:399584399584400495912Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRNA polymerase sigma factor4e-0858.9
NC_014815:5888934:589354558935455894543999Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily7e-0858.2
NC_010162:9207000:9230543923054392315501008Sorangium cellulosum 'So ce 56', complete genomeECF family RNA polymerase sigma factor4e-0755.8
NC_014318:6817860:683774368377436838723981Amycolatopsis mediterranei U32 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily9e-0754.7
NC_017186:6817904:683778768377876838761975Amycolatopsis mediterranei S699 chromosome, complete genomeRNA polymerase factor sigma-701e-0654.3
NC_003888:7866148:788926678892667890168903Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma factor1e-0653.9