Pre_GI Gene

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Host: NC_010162 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010162:9207000 Sorangium cellulosum 'So ce 56', complete genome

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
920718192086501470transposaseQuickGO ontologyBLASTP
920964892113121665transposaseQuickGO ontologyBLASTP
92113099211731423transposaseQuickGO ontologyBLASTP
92117259212063339transposaseQuickGO ontologyBLASTP
92140469214759714hypothetical protein
92154529216447996hypothetical proteinBLASTP
92164449216866423transposaseQuickGO ontologyBLASTP
92168609217198339transposaseQuickGO ontologyBLASTP
921780092189661167hypothetical proteinBLASTP
92196699220001333hypothetical protein
922012892214741347hypothetical proteinBLASTP
92217229222201480hypothetical protein
922309792245091413putative secreted proteinQuickGO ontology
92247969225725930alphabeta fold family hydrolaseQuickGO ontologyBLASTP
92257369226200465putative cytochrome P450QuickGO ontologyBLASTP
92264419227394954hypothetical protein
922755792285671011transcription factor jumonji domain-containing proteinQuickGO ontologyBLASTP
92286179229141525proline-rich family proteinQuickGO ontology
922923392304951263hypothetical protein
923054392315501008ECF family RNA polymerase sigma factorQuickGO ontologyBLASTP
92315479232134588hypothetical proteinBLASTP
92324769233168693reverse transcriptaseQuickGO ontologyBLASTP