Pre_GI: BLASTP Hits

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Query: NC_009092:179226:192893 Shewanella loihica PV-4, complete genome

Start: 192893, End: 193870, Length: 978

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013173:2261396:226648522664852267468984Desulfomicrobium baculatum DSM 4028, complete genomeABC-type sugar transport system, ATPase component1e-56220
NC_002506:207097:2293382293382303871050Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein6e-48191
NC_012583:242760:2642132642132652621050Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein6e-48191
NC_012580:207025:229340229340230314975Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein5e-48191
NC_016446:979884:100218810021881003162975Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeABC-type sugar transport system ATPase component5e-48191
NC_016945:207089:229393229393230367975Vibrio cholerae IEC224 chromosome II, complete sequencesugar ABC transporter ATPase5e-48191
NC_017192:88940:1061581061581083502193Arcobacter sp. L, complete genometwo-component sensor kinase1e-20100
NC_007498:1072112:1076128107612810778731746Pelobacter carbinolicus DSM 2380, complete genomesensory box histidine kinase3e-2099.8
NC_012796:2757500:2774330277433027753581029Desulfovibrio magneticus RS-1, complete genomehypothetical protein3e-1789.7
NC_008741:81914:8288382883840881206Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,hypothetical protein8e-1581.6
NC_010814:3332088:3332088333208833347842697Geobacter lovleyi SZ, complete genomemulti-sensor hybrid histidine kinase2e-1377
NC_011769:2248902:2272085227208522756603576Desulfovibrio vulgaris str. 'Miyazaki F', complete genomemulti-sensor hybrid histidine kinase1e-1274.3
NC_015416:2864917:2864917286491728677782862Methanosaeta concilii GP-6 chromosome, complete genomepentapeptide repeat-containing protein3e-1169.7
NC_009925:3344894:3361646336164633645402895Acaryochloris marina MBIC11017, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor7e-1065.1
NC_002937:1634287:1644419164441916475383120Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completesensory box histidine kinase/response regulator1e-0757.4
NC_008751:1851358:1858918185891818620373120Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomemulti-sensor hybrid histidine kinase2e-0757
NC_020409:1407857:1440551144055114432172667Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Sensor histidine kinase response regulator4e-0755.8
NC_007498:1072112:1091829109182910950203192Pelobacter carbinolicus DSM 2380, complete genomesensory box/FOG: EAL domain/GGDEF domain containing protein6e-0755.5
NC_016776:3714642:3750058375005837523282271Bacteroides fragilis 638R, complete genomeputative two-component regulator sensor kinase1e-0654.3
NC_006347:3760447:3795861379586137981312271Bacteroides fragilis YCH46, complete genomeprobable two-component system sensor histidine kinase1e-0654.3
NC_003228:3690596:3704567370456737068372271Bacteroides fragilis NCTC 9343, complete genomeputative two-component regulator sensor kinase1e-0654.3