Pre_GI: BLASTP Hits

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Query: NC_009092:1047500:1052477 Shewanella loihica PV-4, complete genome

Start: 1052477, End: 1052938, Length: 462

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012912:4194821:420930442093044209753450Dickeya zeae Ech1591, complete genomeDNA-directed DNA polymerase5e-31132
NC_004547:442927:460923460923461372450Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeDNA polymerase III subunit chi2e-30130
NC_014500:443874:446746446746447195450Dickeya dadantii 3937 chromosome, complete genomeDNA polymerase III, subunit chi9e-30129
NC_012880:4117376:413062341306234131093471Dickeya dadantii Ech703, complete genomeDNA-directed DNA polymerase1e-29128
NC_020418:116500:159235159235159684450Morganella morganii subsp. morganii KT, complete genomeDNA polymerase III chi subunit1e-28125
NC_007712:3629358:365215036521503652599450Sodalis glossinidius str. 'morsitans', complete genomeDNA polymerase III chi subunit3e-28124
NC_015061:4203767:422007242200724220557486Rahnella sp. Y9602 chromosome, complete genomeDNA-directed DNA polymerase7e-27119
NC_017047:4298207:431398743139874314472486Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase III subunit chi7e-27119
NC_010473:4564590:458366845836684584111444Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase III, chi subunit2e-26117
AC_000091:4472000:448851744885174488960444Escherichia coli W3110 DNA, complete genomeDNA polymerase III, chi subunit2e-26117
NC_000913:4462782:448186044818604482303444Escherichia coli K12, complete genomeDNA polymerase III subunit chi2e-26117
NC_011742:4795733:481305648130564813499444Escherichia coli S88 chromosome, complete genomeDNA polymerase III subunit chi6e-26116
NC_007613:4217557:423603942360394236482444Shigella boydii Sb227, complete genomeDNA polymerase III chi subunit6e-26116
NC_010658:4494103:449410344941034494546444Shigella boydii CDC 3083-94, complete genomeDNA polymerase III, chi subunit6e-26116
NC_010498:4821519:483881248388124839294483Escherichia coli SMS-3-5, complete genomeDNA polymerase III, chi subunit9e-26115
NC_012967:4449576:446687044668704467313444Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase III subunit chi8e-26115
NC_016632:1695500:170252917025291702981453Serratia symbiotica str. 'Cinara cedri' chromosome, completeDNA polymerase III subunit chi4e-25113
NC_020063:4127161:415030241503024150745444Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA polymerase III, chi subunit7e-25112
NC_020211:554736:557625557625558074450Serratia marcescens WW4, complete genomeDNA polymerase III, chi subunit1e-23108
NC_017270:2500815:251872225187222519186465Vibrio cholerae LMA3984-4 chromosome chromosome I, completeDNA polymerase III subunit chi2e-23108
NC_008463:1223012:123493412349341235362429Pseudomonas aeruginosa UCBPP-PA14, complete genomeDNA polymerase holoenzyme chi subunit4e-23106
NC_002516:4285477:429042742904274290855429Pseudomonas aeruginosa PAO1, complete genomeDNA polymerase III subunit chi1e-22105
NC_018080:1100047:111369611136961114124429Pseudomonas aeruginosa DK2 chromosome, complete genomeDNA polymerase III subunit chi1e-22105
NC_011770:1226923:123912312391231239551429Pseudomonas aeruginosa LESB58, complete genomeDNA polymerase III, chi subunit1e-22105
NC_007484:293763:315513315513315944432Nitrosococcus oceani ATCC 19707, complete genomeDNA polymerase III chi subunit, HolC4e-2097.1
NC_018012:1076839:109639310963931096824432Thiocystis violascens DSM 198 chromosome, complete genomeDNA polymerase III subunit chi2e-1891.7
NC_020829:4246847:426501642650164265444429Pseudomonas denitrificans ATCC 13867, complete genomeDNA polymerase III subunit chi1e-1685.5
NC_002977:2254440:225727322572732257731459Methylococcus capsulatus str. Bath, complete genomeDNA polymerase III, chi subunit, putative1e-1582
NC_011586:268927:334559334559334966408Acinetobacter baumannii AB0057 chromosome, complete genomeDNA polymerase III subunit chi1e-0962
NC_015136:813701:829230829230829646417Burkholderia sp. CCGE1001 chromosome 1, complete sequenceDNA polymerase III chi subunit HolC5e-0960.1
NC_008825:2063990:207745320774532077887435Methylibium petroleiphilum PM1, complete genomeDNA polymerase III, chi subunit, putative2e-0754.7