Pre_GI: BLASTP Hits

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Query: NC_008595:5168941:5182819 Mycobacterium avium 104, complete genome

Start: 5182819, End: 5183520, Length: 702

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008390:2156188:215618821561882156958771Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, GntR family7e-2097.4
NC_015376:2061990:208370120837012084468768Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator1e-1893.6
NC_015942:63440:819408194082698759Acidithiobacillus ferrivorans SS3 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain5e-1787.8
NC_014829:3964616:398018939801893980911723Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, GntR family2e-1685.9
NC_013595:9149273:917088891708889171607720Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family1e-1273.6
NC_008095:7614000:761995076199507620693744Myxococcus xanthus DK 1622, complete genometranscriptional regulator, GntR family3e-1272
NC_016109:5455060:545729554572955458083789Kitasatospora setae KM-6054, complete genomeGntR family transcriptional regulator2e-1065.9
NC_004631:3841975:384910438491043849847744Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative GntR-family transcriptional regulator8e-1063.9
NC_011083:3985618:399864839986483999391744Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative GntR-family transcriptional regulator8e-1063.9
NC_011149:3895921:390895139089513909694744Salmonella enterica subsp. enterica serovar Agona str. SL483,putative GntR-family transcriptional regulator8e-1063.9
NC_011080:3941909:395502339550233955766744Salmonella enterica subsp. enterica serovar Newport str. SL254,putative GntR-family transcriptional regulator8e-1063.9
NC_006511:3759550:377257137725713773314744Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative GntR-family transcriptional regulator8e-1063.9
NC_010102:3919999:393253339325333933276744Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-1063.9
NC_003197:3971905:398443939844393985182744Salmonella typhimurium LT2, complete genomeputative regulatory protein8e-1063.9
NC_003198:3855157:386361438636143864357744Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative GntR-family transcriptional regulator8e-1063.9
NC_011094:3853036:386615138661513866894744Salmonella enterica subsp. enterica serovar Schwarzengrund strGntR family transcriptional regulator8e-1063.9
NC_006905:3913988:392410639241063924849744Salmonella enterica subsp. enterica serovar Choleraesuis strputative regulatory protein, gntR family8e-1063.9
NC_017046:3991551:400458040045804005323744Salmonella enterica subsp. enterica serovar Typhimurium str. 798GntR family transcriptional regulator8e-1063.9
NC_016863:3933848:394573839457383946481744Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein8e-1063.9
NC_016857:3993864:400575340057534006496744Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74GntR family transcriptional regulator8e-1063.9
NC_016856:3985597:399813139981313998874744Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein8e-1063.9
NC_016810:3993863:400575240057524006495744Salmonella enterica subsp. enterica serovar Typhimurium strGntR family transcriptional regulator8e-1063.9
NC_011147:3755725:376825037682503768993744Salmonella enterica subsp. enterica serovar Paratyphi A strGntR family transcriptional regulator8e-1063.9
NC_007929:1290568:129384012938401294538699Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, GntR family3e-0962
NC_004193:375416:640434640434641180747Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator5e-0961.2
NC_008525:1493317:149648314964831497184702Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator1e-0860.1
NC_015436:1:104371043711204768Spirochaeta coccoides DSM 17374 chromosome, complete genometranscriptional regulator, GntR family with UTRA sensor domain3e-0858.9
NC_011978:351465:361597361597362442846Thermotoga neapolitana DSM 4359, complete genomeTranscriptional regulator, GntR family4e-0858.5
NC_020244:3961337:396499839649983965708711Bacillus subtilis XF-1, complete genomeputative HTH-type transcriptional regulator2e-0756.2
NC_016860:3995445:400733540073354007817483Salmonella enterica subsp. enterica serovar Typhimurium strGntR family transcriptional regulator3e-0755.5
NC_007492:3180480:322535632253563226087732Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, GntR family3e-0755.5
NC_017195:3919000:392472639247263925436711Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, GntR family4e-0755.1
NC_014479:3939183:394430239443023945012711Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative GntR family transcriptional regulator4e-0755.1
NC_015566:2420287:242680924268092427513705Serratia sp. AS12 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain9e-0753.9
NC_015567:2420169:242669124266912427395705Serratia sp. AS9 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain9e-0753.9
NC_015975:380500:405127405127405825699Lactobacillus ruminis ATCC 27782 chromosome, complete genomeGntR family transcriptional regulator1e-0653.5
NC_015978:412856:431333431333432055723Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein1e-0653.5
NC_007509:832473:835233835233836093861Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, GntR family5e-0651.2
NC_012470:1061392:106354310635431064241699Streptococcus equi subsp. zooepidemicus, complete genomeGntR family regulatory protein6e-0651.2
NC_014910:2015627:202915620291562029947792Alicycliphilus denitrificans BC chromosome, complete genomeubic transcription regulator-associated domain-containing protein7e-0650.8
NC_004337:3590323:388820638882063888880675Shigella flexneri 2a str. 301, complete genomeputative transcriptional regulator9e-0650.4