Pre_GI: BLASTP Hits

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Query: NC_008593:1103293:1114865 Clostridium novyi NT, complete genome

Start: 1114865, End: 1116217, Length: 1353

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010520:2860960:2869230286923028706181389Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar hook-length control protein8e-32138
NC_009698:2649453:2657722265772226591101389Clostridium botulinum A str. Hall chromosome, complete genomeflagellar hook-length control protein1e-31137
NC_009697:2714668:2720795272079527221831389Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar hook-length control protein1e-31137
NC_021182:2883716:2904234290423429067862553Clostridium pasteurianum BC1, complete genomeflagellar hook-length control protein7e-31135
NC_017297:2854934:2855785285578528571731389Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar hook-length control protein1e-30134
NC_014328:1135854:1137684113768411392251542Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar hook-length control protein1e-28128
NC_009617:4911595:4920721492072149220671347Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar hook-length control protein4e-23109
NC_010674:858397:8635498635498648321284Clostridium botulinum B str. Eklund 17B, complete genomeputative flagellar hook-length control protein1e-21104
NC_010723:833870:8418468418468431501305Clostridium botulinum E3 str. Alaska E43, complete genomeputative flagellar hook-length control protein FliK1e-21104
NC_020291:4903981:4931838493183849332261389Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar hook-length control protein FliK1e-1997.8