Pre_GI: BLASTP Hits

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Query: NC_008593:1103293:1114410 Clostridium novyi NT, complete genome

Start: 1114410, End: 1114844, Length: 435

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009698:2649453:265911626591162659553438Clostridium botulinum A str. Hall chromosome, complete genomeflagellar protein FliJ3e-26117
NC_009697:2714668:272218927221892722626438Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar protein FliJ3e-26117
NC_017297:2854934:285717928571792857616438Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar protein FliJ3e-26117
NC_010520:2860960:287062428706242871061438Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar protein FliJ1e-25115
NC_014328:1135854:113721811372181137655438Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar biosynthesis chaperone FliJ6e-25112
NC_021182:2883716:290679929067992907236438Clostridium pasteurianum BC1, complete genomeflagellar export protein FliJ2e-24110
NC_009617:4911595:492215949221594922596438Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar export protein FliJ2e-1891.3
NC_020291:4903981:493331649333164933759444Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar export protein FliJ8e-1889
NC_010674:858397:863099863099863542444Clostridium botulinum B str. Eklund 17B, complete genomeflagellar export protein FliJ4e-1373.6
NC_010723:833870:841396841396841839444Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar export protein FliJ4e-1373.2