Pre_GI: BLASTP Hits

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Query: NC_008543:2220698:2238767 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 2238767, End: 2239072, Length: 306

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008061:190287:240504240504240902399Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceresponse regulator receiver protein1e-53207
NC_010515:2111691:216484621648462165220375Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceresponse regulator receiver protein2e-53207
NC_011002:772243:774171774171774551381Burkholderia cenocepacia J2315 chromosome 3, complete sequencetwo-component regulatory system, response regulator protein1e-38157
NC_004463:1872537:187851518785151878904390Bradyrhizobium japonicum USDA 110, complete genometwo-component response regulator3e-1373.6
NC_017249:8358438:837558183755818375967387Bradyrhizobium japonicum USDA 6, complete genometwo-component response regulator4e-1373.6
NC_014118:1528851:153593415359341536311378Burkholderia sp. CCGE1002 chromosome chromosome 2, completeresponse regulator receiver protein4e-1373.2
NC_015723:280368:293405293405293740336Cupriavidus necator N-1 chromosome 2, complete sequencetwo-component response regulator receiver2e-1270.9
NC_008825:2700617:270546927054692706083615Methylibium petroleiphilum PM1, complete genometwo component regulator6e-1269.7
NC_008702:2942246:294529629452962945943648Azoarcus sp. BH72, complete genometwo-component response regulator6e-1269.3
NC_017249:263873:270894270894271259366Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-1166.2
NC_009662:1849239:185260618526061853262657Nitratiruptor sp. SB155-2, complete genometwo-component response regulator7e-1165.9
NC_002947:5961096:597775059777505978118369Pseudomonas putida KT2440, complete genomeresponse regulator7e-1165.9
NC_016616:2644883:266033226603322660964633Dechlorosoma suillum PS chromosome, complete genomeresponse regulator1e-1065.1
NC_018000:1207231:120723112072311207641411Sinorhizobium fredii USDA 257 chromosome, complete genomeresponse regulator receiver protein2e-1064.3
NC_015727:1294532:129756712975671298211645Cupriavidus necator N-1 plasmid BB1p, complete sequencetwo-component response regulator3e-1063.9
NC_012483:483425:499974499974500417444Acidobacterium capsulatum ATCC 51196, complete genometwo component response regulator3e-1063.9
NC_016599:2119631:213660821366082136988381Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain4e-1063.5
NC_011992:3752867:376112737611273761756630Acidovorax ebreus TPSY, complete genometwo component transcriptional regulator, LuxR family4e-1063.2
NC_007492:6372900:639806263980626398433372Pseudomonas fluorescens PfO-1, complete genomeResponse regulator receiver domain protein (CheY)6e-1062.8
NC_014366:2513352:251790025179002518523624Gamma proteobacterium HdN1, complete genomeTwo-component response regulator6e-1062.8
NC_014118:1559770:157056215705621570939378Burkholderia sp. CCGE1002 chromosome chromosome 2, completeresponse regulator receiver protein2e-0960.8
NC_015675:4526500:454144145414414541815375Mesorhizobium opportunistum WSM2075 chromosome, complete genomeresponse regulator receiver protein4e-0960.1
NC_011420:365505:370334370334370963630Rhodospirillum centenum SW, complete genometranscriptional regulatory protein FixJ6e-0959.7
NC_015675:4526500:454185745418574542516660Mesorhizobium opportunistum WSM2075 chromosome, complete genometwo component LuxR family transcriptional regulator6e-0959.7
NC_008543:2220698:223619222361922236836645Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetwo component transcriptional regulator, LuxR family8e-0958.9
NC_008061:190287:242833242833243477645Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetwo component transcriptional regulator, LuxR family8e-0958.9
NC_010515:2111691:216715121671512167795645Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetwo component transcriptional regulator, LuxR family8e-0958.9
NC_014972:2371647:2373659237365923750561398Desulfobulbus propionicus DSM 2032 chromosome, complete genomeFis family two component sigma54 specific transcriptional regulator1e-0858.5
NC_013939:148706:151957151957152325369Deferribacter desulfuricans SSM1, complete genometwo-component response regulator2e-0857.8
NC_016830:2642881:266228526622852662923639Pseudomonas fluorescens F113 chromosome, complete genomenitrogen regulation protein NR(I)3e-0857.4
NC_010676:2975572:299083629908362991213378Burkholderia phytofirmans PsJN chromosome 2, complete sequenceresponse regulator receiver protein2e-0857.4
NC_002939:1021297:1038168103816810395711404Geobacter sulfurreducens PCA, complete genomesigma-54 dependent DNA-binding response regulator4e-0857
NC_010676:2975572:299131029913102991933624Burkholderia phytofirmans PsJN chromosome 2, complete sequencetwo component transcriptional regulator, LuxR family4e-0857
NC_011002:772243:771602771602772246645Burkholderia cenocepacia J2315 chromosome 3, complete sequencetwo-component regulatory system, response regulator protein4e-0856.6
NC_004347:4302768:433202143320214332629609Shewanella oneidensis MR-1, complete genomeDNA-binding response regulator5e-0856.6
NC_009512:3251545:326096232609623261582621Pseudomonas putida F1, complete genomeresponse regulator receiver protein5e-0856.6
NC_015379:4249238:425330442533044253942639Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Response regulator, NarL family6e-0856.2
NC_008095:5527707:5527707552770755292601554Myxococcus xanthus DK 1622, complete genomesensor histidine kinase/response rgulator8e-0855.8
NC_017249:3229500:323825232382523238878627Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-0755.5
NC_014121:2514544:254453725445372545172636Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetwo component transcriptional regulator, LuxR family1e-0755.5
NC_013194:1955582:197101119710111971634624Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetwo component transcriptional regulator, LuxR family9e-0855.5
NC_013960:2166367:217016121701612170778618Nitrosococcus halophilus Nc4 chromosome, complete genomeresponse regulator receiver1e-0755.1
NC_010814:1739706:1766648176664817680181371Geobacter lovleyi SZ, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family1e-0755.1
NC_020126:6344827:6344827634482763463501524Myxococcus stipitatus DSM 14675, complete genomesensor histidine kinase/response rgulator1e-0755.1
NC_007298:2689731:268973126897312690366636Dechloromonas aromatica RCB, complete genomeregulatory protein, LuxR:Response regulator receiver2e-0754.3
NC_007492:6372900:639736963973696398034666Pseudomonas fluorescens PfO-1, complete genomeTwo Component Transcriptional Regulator, LuxR family3e-0753.9
NC_017249:8358438:837490383749038375496594Bradyrhizobium japonicum USDA 6, complete genometwo component regulator3e-0753.9
NC_019940:2731105:273333227333322733949618Thioflavicoccus mobilis 8321 chromosome, complete genomeresponse regulator3e-0753.9
NC_017030:9465809:947211794721179472674558Corallococcus coralloides DSM 2259 chromosome, complete genomeFis family DNA-binding response regulator3e-0753.9
NC_010524:4788753:479252847925284793181654Leptothrix cholodnii SP-6, complete genometwo component transcriptional regulator, LuxR family3e-0753.9
NC_010511:6711836:671607867160786716710633Methylobacterium sp. 4-46 chromosome, complete genometwo component LuxR family transcriptional regulator4e-0753.5
NC_017249:3229500:323779232377923238241450Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-0753.5
NC_017030:4062699:4084425408442540859541530Corallococcus coralloides DSM 2259 chromosome, complete genomesensor histidine kinase/response regulator4e-0753.5
NC_004463:1872537:187898618789861879669684Bradyrhizobium japonicum USDA 110, complete genometwo component regulator3e-0753.5
NC_014118:1528851:153498315349831535639657Burkholderia sp. CCGE1002 chromosome chromosome 2, completetwo component transcriptional regulator, LuxR family4e-0753.1
NC_013943:2431643:2449907244990724513281422Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeFis family two component sigma-54 specific transcriptional regulator5e-0753.1
NC_011979:1683964:1687718168771816890821365Geobacter sp. FRC-32, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family5e-0753.1
NC_017096:779550:7851687851687865801413Caldisericum exile AZM16c01, complete genomeNtrC family two-component system response regulator6e-0752.8
NC_017249:263873:270294270294270869576Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-0752.4
NC_007492:2629350:262935026293502629988639Pseudomonas fluorescens PfO-1, complete genomeTwo Component Transcriptional Regulator, LuxR family8e-0752.4
NC_007298:750361:757449757449758060612Dechloromonas aromatica RCB, complete genomeregulatory protein, LuxR:Response regulator receiver8e-0752.4
NC_013946:879199:891344891344892231888Meiothermus ruber DSM 1279 chromosome, complete genomeresponse regulator receiver protein1e-0652
NC_010524:4402478:440461544046154405262648Leptothrix cholodnii SP-6, complete genometwo component transcriptional regulator, LuxR family1e-0652
NC_013960:1587761:162743316274331628122690Nitrosococcus halophilus Nc4 chromosome, complete genomeregulatory protein LuxR2e-0651.6
NC_012483:483425:500474500474501130657Acidobacterium capsulatum ATCC 51196, complete genomeDNA-binding response regulator FixJ1e-0651.6
NC_002947:5961096:597811559781155979107993Pseudomonas putida KT2440, complete genomeDNA-binding response regulator, LuxR family1e-0651.6
NC_012559:768939:7871377871377896412505Laribacter hongkongensis HLHK9, complete genomePutative PAS/PAC sensor protein2e-0651.2
NC_015566:3269469:328545032854503286070621Serratia sp. AS12 chromosome, complete genometwo component LuxR family transcriptional regulator2e-0651.2
NC_011978:493800:4951624951624962711110Thermotoga neapolitana DSM 4359, complete genomeResponse regulator2e-0650.8
NC_015711:7471500:7471562747156274729531392Myxococcus fulvus HW-1 chromosome, complete genomesensor histidine kinase/response rgulator3e-0650.8
NC_011761:2785660:282301428230142823529516Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA-binding response regulator3e-0650.4
NC_011206:2685499:272279327227932723368576Acidithiobacillus ferrooxidans ATCC 53993, complete genometwo component transcriptional regulator, Fis family3e-0650.4
NC_007973:1821753:184104018410401841414375Ralstonia metallidurans CH34 chromosome 1, complete sequenceresponse regulator receiver domain protein (CheY-like)3e-0650.4
NC_011296:1086223:1086223108622310875631341Thermodesulfovibrio yellowstonii DSM 11347, complete genomeacetoacetate metabolism regulatory protein AtoC4e-0650.1
NC_014118:1559770:156960715696071570269663Burkholderia sp. CCGE1002 chromosome chromosome 2, completetwo component transcriptional regulator, LuxR family4e-0650.1
NC_020126:6264651:6270878627087862722811404Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator4e-0650.1
NC_014972:2089003:209758720975872098162576Desulfobulbus propionicus DSM 2032 chromosome, complete genomeresponse regulator receiver protein4e-0650.1
NC_014817:1063173:1076438107643810775861149Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceresponse regulator receiver sensor signal transduction histidine kinase5e-0649.7
NC_011979:1683964:169188516918851692799915Geobacter sp. FRC-32, complete genomeresponse regulator receiver modulated GAF sensor protein7e-0649.3
NC_010511:6711836:671559167155916715953363Methylobacterium sp. 4-46 chromosome, complete genomeresponse regulator receiver protein7e-0649.3
NC_015942:1824847:184435718443571844932576Acidithiobacillus ferrivorans SS3 chromosome, complete genometwo component Fis family transcriptional regulator7e-0649.3