Pre_GI: BLASTP Hits

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Query: NC_008380:58232:62045 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 62045, End: 62992, Length: 948

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012850:4422966:442742644274264428373948Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeOrnithine cyclodeaminase1e-138492
NC_007761:57199:610116101161958948Rhizobium etli CFN 42, complete genomeornithine cyclodeaminase protein2e-134478
NC_010994:57362:611626116262109948Rhizobium etli CIAT 652, complete genomeornithine cyclodeaminase protein4e-132471
NC_011985:61003:654806548066430951Agrobacterium radiobacter K84 chromosome 1, complete genomeornithine cyclodeaminase protein2e-107389
NC_012587:3613162:361933436193343620281948Rhizobium sp. NGR234, complete genomeornithine cyclodeaminase/mu-crystallin family protein3e-93342
NC_007929:1290568:131007413100741311060987Lactobacillus salivarius subsp. salivarius UCC118, complete genomeOrnithine cyclodeaminase8e-29127
NC_013526:911909:940597940597941505909Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeOrnithine cyclodeaminase3e-27122
NC_020164:2219612:221961222196122220559948Staphylococcus warneri SG1, complete genomeornithine cyclodeaminase1e-26120
NC_007168:2448422:245152424515242452483960Staphylococcus haemolyticus JCSC1435, complete genomeornithine cyclodeaminase1e-26120
NC_015320:790137:8061088061088071151008Archaeoglobus veneficus SNP6 chromosome, complete genomealanine dehydrogenase1e-23110
NC_004461:277291:316851316851317801951Staphylococcus epidermidis ATCC 12228, complete genomeornithine cyclodeaminase2e-23110
NC_009832:3313058:332765333276533328609957Serratia proteamaculans 568, complete genomeOrnithine cyclodeaminase3e-21102
NC_014334:369974:377906377906378901996Lactobacillus casei str. Zhang chromosome, complete genomeputative ornithine cyclodeaminase1e-20100
NC_010999:349252:354632354632355627996Lactobacillus casei, complete genomeOrnithine cyclodeaminase/mu-crystallin:Shikimate/quinate 5-dehydrogenase1e-20100
NC_009464:1397739:140147014014701402441972Uncultured methanogenic archaeon RC-I, complete genomeornithine cyclodeaminase8e-2098.2
NC_009380:1177316:118035711803571181346990Salinispora tropica CNB-440 chromosome, complete genomeornithine cyclodeaminase2e-1997.1
NC_014507:2568933:258515825851582586093936Methanoplanus petrolearius DSM 11571 chromosome, complete genomeornithine cyclodeaminase2e-1996.7
NC_014761:1321187:132335113233511324247897Oceanithermus profundus DSM 14977 chromosome, complete genomeornithine cyclodeaminase4e-1892.4
NC_013194:761166:778243778243779202960Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeOrnithine cyclodeaminase5e-1582
NC_019962:1750497:180660218066021807591990Natrinema pellirubrum DSM 15624, complete genomeputative ornithine cyclodeaminase, mu-crystallin6e-1581.6
NC_016629:2784000:278836227883622789264903Desulfovibrio africanus str. Walvis Bay chromosome, completeornithine cyclodeaminase/mu-crystallin1e-1480.5
NC_016002:2652500:265508426550842656022939Pseudogulbenkiania sp. NH8B, complete genomeornithine cyclodeaminase3e-1375.9
NC_015957:7348269:738051373805137381427915Streptomyces violaceusniger Tu 4113 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin5e-1375.5
NC_013744:300000:312490312490313479990Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeOrnithine cyclodeaminase2e-1273.6
NC_018000:1852691:186701018670101867891882Sinorhizobium fredii USDA 257 chromosome, complete genomeornithine cyclodeaminase 23e-1273.2
NC_009328:2378345:2387462238746223884661005Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeectoine utilization protein EutC8e-1271.6
NC_007908:1010162:102502710250271025998972Rhodoferax ferrireducens T118, complete genomeOrnithine cyclodeaminase2e-1067
NC_003305:1035342:105174610517461052690945Agrobacterium tumefaciens str. C58 chromosome linear, completeornithine cyclodeaminase2e-1066.6
NC_003063:1019674:102206610220661023052987Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-1066.2
NC_008601:1518136:1532670153267015336861017Francisella tularensis subsp. novicida U112, complete genomeornithine cyclodeaminase6e-1065.1
NC_002947:4994335:502668950266895027681993Pseudomonas putida KT2440, complete genomeornithine cyclodeaminase1e-0964.3
NC_012622:1646000:166239016623901663319930Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin2e-0963.5
NC_012623:960327:963301963301964230930Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin2e-0963.5
NC_013769:1705500:172354817235481724477930Sulfolobus islandicus L.D.8.5 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin2e-0963.5
NC_012726:1611936:163051516305151631444930Sulfolobus islandicus M.16.4 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin2e-0963.5
NC_017275:1635959:165459616545961655525930Sulfolobus islandicus HVE10/4 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin2e-0963.5
NC_017276:1491473:151011115101111511040930Sulfolobus islandicus REY15A chromosome, complete genomeornithine cyclodeaminase/mu-crystallin2e-0963.5
NC_007880:556334:556334556334557182849Francisella tularensis subsp. holarctica, complete genomeornithine cyclodeaminase2e-0963.5
NC_009749:558171:558171558171559031861Francisella tularensis subsp. holarctica FTA, complete genomeornithine cyclodeaminase2e-0963.5
NC_010336:1335558:1338148133814813391641017Francisella philomiragia subsp. philomiragia ATCC 25017, completeOrnithine cyclodeaminase2e-0963.2
NC_007952:1416000:1418343141834314197431401Burkholderia xenovorans LB400 chromosome 2, complete sequenceornithine cyclodeaminase/Mu-crystallin family protein2e-0963.2
NC_012588:1585808:160438516043851605314930Sulfolobus islandicus M.14.25 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin2e-0963.2
NC_013202:906044:935148935148936140993Halomicrobium mukohataei DSM 12286, complete genomeOrnithine cyclodeaminase3e-0962.8
NC_015856:633353:650341650341651258918Collimonas fungivorans Ter331 chromosome, complete genomeornithine cyclodeaminase3e-0962.8
NC_009257:386283:386283386283387218936Francisella tularensis subsp. tularensis WY96-3418 chromosome,ornithine cyclodeaminase6e-0962
NC_002754:319315:321348321348322277930Sulfolobus solfataricus P2, complete genomeOrnithine cyclodeaminase related protein (ocd-like1)7e-0961.6
NC_015151:1872280:188119418811941882159966Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeornithine cyclodeaminase7e-0858.5
NC_015727:1294532:132413713241371325135999Cupriavidus necator N-1 plasmid BB1p, complete sequenceornithine cyclodeaminase Ocd6e-0858.5
NC_013093:2895511:289650028965002897438939Actinosynnema mirum DSM 43827, complete genomeOrnithine cyclodeaminase2e-0757
NC_008786:2425314:244290624429062443889984Verminephrobacter eiseniae EF01-2, complete genomeOrnithine cyclodeaminase7e-0755.1
NC_013173:1231213:125346112534611254420960Desulfomicrobium baculatum DSM 4028, complete genomeOrnithine cyclodeaminase2e-0653.5
NC_016582:7033000:703840670384067039053648Streptomyces bingchenggensis BCW-1 chromosome, complete genomeornithine cyclodeaminase6e-0652
NC_016943:3270308:328337132833713284318948Blastococcus saxobsidens DD2, complete genomeornithine cyclodeaminase/mu-crystallin6e-0652
NC_012914:5938566:595818659581865959154969Paenibacillus sp. JDR-2, complete genomeornithine cyclodeaminase/mu-crystallin8e-0651.2