Pre_GI: BLASTP Hits

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Query: NC_008278:6885254:6885254 Frankia alni ACN14a, complete genome

Start: 6885254, End: 6889669, Length: 4416

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:1611132:1633885163388516385344650Frankia sp. EAN1pec, complete genomeTrwC relaxase0843
NC_014666:8459724:8473764847376484785034740Frankia sp. EuI1c chromosome, complete genomeTrwC relaxase0827
NC_015514:3508022:3522251352225135251422892Cellulomonas fimi ATCC 484 chromosome, complete genomeconjugative relaxase domain-containing protein3e-31138
NC_015671:557720:5632625632625661532892Cellvibrio gilvus ATCC 13127 chromosome, complete genomeTrwC relaxase6e-27124
NC_012803:3691:3912039120426443525Micrococcus luteus NCTC 2665, complete genomeconjugative relaxase domain protein, TrwC/TraI family5e-25117
NC_008278:6885254:691645569164556916904450Frankia alni ACN14a, complete genomehypothetical protein2e-23112
NC_014550:3316115:3319383331938333220312649Arthrobacter arilaitensis Re117, complete genome4e-23111
NC_014830:3387479:3426762342676234300523291Intrasporangium calvum DSM 43043 chromosome, complete genomeTrwC relaxase1e-22110
NC_016585:116143:1339371339371372033267Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative ATP-dependent exoDNAse9e-22107
NC_007575:1694877:1701208170120817045463339Sulfurimonas denitrificans DSM 1251, complete genomeexonuclease V subunit alpha2e-21105
NC_019673:1988853:2027358202735820317464389Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1895.9
NC_009484:2660048:2674385267438526771562772Acidiphilium cryptum JF-5 chromosome, complete genomeexonuclease V subunit alpha3e-1895.5
NC_013757:780835:7808357808357863455511Geodermatophilus obscurus DSM 43160, complete genomeTrwC relaxase3e-1792
NC_013422:991500:1012572101257210154032832Halothiobacillus neapolitanus c2, complete genomeconjugative relaxase domain protein9e-1790.5
NC_015377:34445:5672856728596222895Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequenceTrwC protein2e-1689.4
NC_013714:1048783:1058087105808710622714185Bifidobacterium dentium Bd1, complete genomeTrwC relaxase9e-1687
NC_017955:1667500:1668039166803916735375499Modestobacter marinus, complete genomeDNA primase2e-1585.9
NC_013169:612456:6365886365886401423555Kytococcus sedentarius DSM 20547, complete genomeTrwC relaxase5e-1584.7
NC_010571:2423732:2437973243797324407052733Opitutus terrae PB90-1, complete genomeconjugative relaxase domain protein1e-1483.6
NC_014006:3124818:3167502316750231703452844Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TraA2e-1482.8
NC_018681:5551000:5551247555124755572405994Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein4e-1481.6
NC_007722:2954876:2959510295951029620652556Erythrobacter litoralis HTCC2594, complete genomehypothetical protein1e-1379.7
NC_012483:3731542:3754841375484137575942754Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein2e-1379.3
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA3e-1378.6
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA4e-1378.2
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa8e-1377.4
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA9e-1377
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA1e-1276.6
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-1276.3
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA2e-1276.3
NC_013235:2129982:2155767215576721594623696Nakamurella multipartita DSM 44233, complete genomeTrwC relaxase2e-1276.3
NC_008699:1673181:1673181167318116785745394Nocardioides sp. JS614, complete genomeDNA primase catalytic core, N-terminal domain2e-1275.9
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA3e-1275.5
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA7e-1274.3
NC_016943:1422926:1442885144288514483835499Blastococcus saxobsidens DD2, complete genomeDNA primase7e-1274.3
NC_016943:1442885:1442885144288514483835499Blastococcus saxobsidens DD2, complete genomeDNA primase7e-1274.3
NC_011916:467106:4887684887684915782811Caulobacter crescentus NA1000 chromosome, complete genomeDNA relaxase/conjugal transfer nickase-helicase TrwC1e-1173.6
NC_011296:281930:2901722901722957035532Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein1e-1173.6
NC_020453:3950838:3987555398755539886791125Agromonas oligotrophica S58 DNA, complete genomeputative ATP-dependent exoDNAse (exonuclease V) subunit alpha2e-1172.4
NC_016887:3160000:3164447316444731704255979Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein5e-1171.2
NC_011365:1969198:198678719867871987755969Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTrwC relaxase8e-1170.9
NC_013131:10370765:1038668610386686103908464161Catenulispora acidiphila DSM 44928, complete genomeTrwC relaxase7e-1170.9
NC_014158:233733:2645282645282674012874Tsukamurella paurometabola DSM 20162 chromosome, complete genomeTrwC relaxase1e-1070.1
NC_010793:1158279:1162791116279111651962406Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-1070.1
NC_010793:1811401:1869177186917718715432367Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-1070.1
NC_009007:57804:7601176011793463336Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraI4e-1068.2
NC_009338:2925286:2944475294447529503425868Mycobacterium gilvum PYR-GCK chromosome, complete genomeexonuclease V subunit alpha4e-1068.2
NC_012483:3672768:3676616367661636793962781Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein5e-1067.8
NC_017955:3670670:3715007371500737204815475Modestobacter marinus, complete genomeDNA primase7e-1067.8
NC_008726:3968222:3968222396822239740805859Mycobacterium vanbaalenii PYR-1, complete genomeATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like8e-1067.4
NC_010170:3944228:3975774397577439785002727Bordetella petrii, complete genomeconjugal transfer protein9e-1067.4
NC_017955:3057592:3092495309249530980295535Modestobacter marinus, complete genomeDNA primase1e-0967
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA1e-0967
NC_009998:62000:6726667266732265961Shewanella baltica OS195 plasmid pS19501, complete sequenceconjugative transfer relaxase protein TraI1e-0966.6
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA2e-0966.2
NC_009378:106193:1061931061931114335241Yersinia pestis Pestoides F plasmid MT, complete sequenceconjugal transfer nickase/helicase TraI3e-0965.5
NC_008697:118859:1188591188591247625904Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceDNA primase catalytic core, N-terminal domain4e-0965.1
NC_010606:25090:2872928729308792151Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceTrwC protein4e-0965.1
NC_010793:1468849:1475436147543614782402805Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA5e-0964.7
NC_008435:1131242:1160526116052611635463021Rhodopseudomonas palustris BisA53, complete genomeMobA/MobL protein5e-0964.7
NC_014215:1243125:1244941124494112479553015Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,8e-0963.9
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein8e-0963.9
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-0863.2
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA2e-0862.8
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA2e-0862.8
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA3e-0862.4
NC_007925:1085500:1087177108717710902813105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein4e-0862
NC_016846:24500:4675446754520125259Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer nickase/helicase TraI4e-0862
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein4e-0861.6
NC_007385:157516:1693421693421736254284Shigella sonnei Ss046 plasmid pSS_046, complete sequenceoriT nicking and unwinding protein, fragment4e-0861.6
NC_010793:1695716:1698219169821917002312013Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA6e-0861.2
NC_008705:1557711:1557711155771115622824572Mycobacterium sp. KMS, complete genomeATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein6e-0861.2
NC_008146:1535827:1553403155340315579744572Mycobacterium sp. MCS, complete genomeATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein6e-0861.2
NC_016631:3917253:3931643393164339343962754Granulicella mallensis MP5ACTX8 chromosome, complete genomeconjugative relaxase domain-containing protein5e-0861.2
NC_015850:1006980:1016198101619810193653168Acidithiobacillus caldus SM-1 chromosome, complete genomeputative TraI protein5e-0861.2
NC_007722:851129:8691878691878720992913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein1e-0760.5
NC_015458:327009:3562813562813591782898Pusillimonas sp. T7-7 chromosome, complete genomeTrwC1e-0760.1
NC_006085:925604:9256049256049272951692Propionibacterium acnes KPA171202, complete genometransfer protein homolog TraA1e-0760.1
NC_010793:1922000:1933705193370519347961092Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-0759.7
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA3e-0758.9
NC_017955:2494640:2540042254004225419881947Modestobacter marinus, complete genomeATP-dependent exoDNAse subunit alpha/helicase superfamily I protein3e-0758.9
NC_007722:168937:1893461893461922582913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein3e-0758.9
NC_014819:25765:4311743117462603144Asticcacaulis excentricus CB 48 plasmid pASTEX02, completeconjugative relaxase domain protein4e-0758.2
NC_016626:1751159:1751159175115917542153057Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative traC, type IV secretion system1e-0657
NC_007794:2304768:2324303232430323259311629Novosphingobium aromaticivorans DSM 12444, complete genomeTrwC protein2e-0656.6
NC_008322:1186000:1188914118891411920213108Shewanella sp. MR-7, complete genomeTrwC protein2e-0656.6
NC_010943:3069082:3094419309441930971992781Stenotrophomonas maltophilia K279a, complete genomeputative conjugal transfer protein TraA1e-0656.6
NC_013757:21245:2124521245240252781Geodermatophilus obscurus DSM 43160, complete genomeTrwC relaxase1e-0656.6
NC_016048:522637:5316525316525329381287Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-0655.8
NC_010511:6067000:6080978608097860832122235Methylobacterium sp. 4-46 chromosome, complete genomerecombinase D6e-0654.3
NC_019697:1696000:1699454169945417017062253Chamaesiphon minutus PCC 6605, complete genomehelicase, putative, RecD/TraA family9e-0653.9