Pre_GI: BLASTP Hits

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Query: NC_008261:1787345:1794854 Clostridium perfringens ATCC 13124, complete genome

Start: 1794854, End: 1795564, Length: 711

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: The species type strain, originally isolated from a human gas gangrene patient. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. C. perfringens have been developed and the species became a model organism in clostridial genetic studies. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1295261:132121613212161321896681Clostridium botulinum BKT015925 chromosome, complete genomephage-like protein5e-23107
NC_011773:549500:557944557944558621678Bacillus cereus AH820 chromosome, complete genomeGp13 protein9e-23107
NC_008593:1362218:137177813717781372461684Clostridium novyi NT, complete genomeconserved phage-related protein2e-21102
NC_020291:1122282:113714911371491137850702Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage-rlike protein2e-2099.8
NC_010520:2101515:211484421148442115521678Clostridium botulinum A3 str. Loch Maree, complete genomeputative phage tail protein2e-1893.2
NC_010674:950276:965214965214965930717Clostridium botulinum B str. Eklund 17B, complete genomeprophage pi2 protein 433e-1685.5
NC_004606:904323:908291908291908953663Streptococcus pyogenes SSI-1, complete genomehypothetical protein5e-1684.7
NC_012471:781063:813226813226813933708Streptococcus equi subsp. equi 4047, complete genomephage protein2e-1479.7
NC_006086:987991:9996179996171000324708Streptococcus pyogenes MGAS10394, complete genomeunknown phage protein1e-1479.7
NC_020291:795500:824893824893825561669Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage putative tail component2e-1479
NC_004606:623853:653777653777654493717Streptococcus pyogenes SSI-1, complete genomehypothetical protein1e-1376.6
NC_008022:1255210:126680312668031267519717Streptococcus pyogenes MGAS10270, complete genomephage protein1e-1376.6
NC_007296:1230614:123970512397051240421717Streptococcus pyogenes MGAS6180, complete genomephage protein1e-1376.6
NC_004070:1231883:124239212423921243108717Streptococcus pyogenes MGAS315, complete genomehypothetical protein1e-1376.6
NC_008021:531730:560741560741561448708Streptococcus pyogenes MGAS9429, complete genomephage protein2e-1376.3
NC_008022:556457:562018562018562725708Streptococcus pyogenes MGAS10270, complete genomephage protein2e-1376.3
NC_008024:572916:579195579195579902708Streptococcus pyogenes MGAS10750, complete genomephage protein2e-1376.3
NC_009332:1269000:127924312792431279950708Streptococcus pyogenes str. Manfredo chromosome, complete genomehypothetical protein2e-1376.3
NC_003485:1450045:146247114624711463187717Streptococcus pyogenes MGAS8232, complete genomehypothetical protein3e-1375.5
NC_006086:1329915:134208413420841342800717Streptococcus pyogenes MGAS10394, complete genomeunknown phage protein3e-1375.5
NC_002737:533291:559855559855560571717Streptococcus pyogenes M1 GAS, complete genomehypothetical protein1e-1273.6
NC_010723:2269372:227265022726502273324675Clostridium botulinum E3 str. Alaska E43, complete genomeputative phage tail component5e-1271.2
NC_010674:2328307:233610623361062336783678Clostridium botulinum B str. Eklund 17B, complete genomeputative phage tail component6e-1270.9
NC_014218:1663486:167891516789151679607693Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomehypothetical protein1e-1067
NC_003485:602640:608575608575609318744Streptococcus pyogenes MGAS8232, complete genomehypothetical protein5e-1064.7
NC_014246:1402500:143099214309921431678687Mobiluncus curtisii ATCC 43063 chromosome, complete genomehypothetical protein5e-1064.7
NC_008555:1204000:123664712366471237387741Listeria welshimeri serovar 6b str. SLCC5334, complete genomeconserved phage-related protein1e-0860.1
NC_003212:2592600:259472325947232595463741Listeria innocua Clip11262, complete genomehypothetical protein2e-0859.7
NC_021182:3525523:356016335601633560600438Clostridium pasteurianum BC1, complete genome4e-0652