Pre_GI: BLASTP Hits

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Query: NC_008148:2231045:2273303 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2273303, End: 2274277, Length: 975

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013526:911909:922406922406923182777Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeMicrococcal nuclease4e-2099
NC_003450:1903110:196634919663491966987639Corynebacterium glutamicum ATCC 13032, complete genomemicrococcal nuclease-like protein5e-1788.6
NC_010424:825117:827685827685828668984Candidatus Desulforudis audaxviator MP104C, complete genomenuclease (SNase domain protein)2e-1686.3
NC_005791:1173000:118809511880951188652558Methanococcus maripaludis S2, complete genomeStaphylococcus nuclease (SNase-like):Thermonuclease1e-1584.3
NC_015847:1261276:127547112754711276028558Methanococcus maripaludis XI chromosome, complete genomenuclease2e-1583.6
NC_009135:330628:350253350253350804552Methanococcus maripaludis C5, complete genomenuclease (SNase domain protein)2e-1583.6
NC_013205:19295:2513025130262481119Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,nuclease (SNase domain protein)5e-1582
NC_011295:33500:432104321044091882Coprothermobacter proteolyticus DSM 5265, complete genomeprophage LambdaCh01, nuclease domain protein2e-1480.1
NC_009637:438037:457351457351457902552Methanococcus maripaludis C7 chromosome, complete genomenuclease4e-1479
NC_013156:154233:175203175203175772570Methanocaldococcus fervens AG86, complete genomenuclease (SNase domain protein)5e-1479
NC_017337:853221:866882866882867568687Staphylococcus aureus subsp. aureus ED133 chromosome, completestaphylococcal thermonuclease precursor6e-1375.1
NC_017351:885000:895780895780896466687Staphylococcus aureus subsp. aureus 11819-97 chromosome, completethermonuclease7e-1375.1
NC_017342:2486000:249197024919702492656687Staphylococcus aureus subsp. aureus TCH60 chromosome, completethermonuclease7e-1374.7
NC_002745:840848:855748855748856434687Staphylococcus aureus subsp. aureus N315, complete genomestaphylococcal nuclease1e-1274.3
NC_014253:431942:438386438386438943558Methanohalobium evestigatum Z-7303 chromosome, complete genomenuclease1e-1274.3
NC_016928:838500:849565849565850251687Staphylococcus aureus subsp. aureus M013 chromosome, completephage-encoded chromosome degrading nuclease YokF1e-1274.3
NC_002952:884500:895661895661896347687Staphylococcus aureus subsp. aureus MRSA252, complete genomethermonuclease precursor2e-1273.9
NC_016941:807155:842093842093842761669Staphylococcus aureus subsp. aureus MSHR1132, complete genomethermonuclease3e-1272.8
NC_014122:773825:792300792300792836537Methanocaldococcus infernus ME chromosome, complete genomenuclease (SNase domain protein)3e-1169.7
NC_009634:547995:568406568406568975570Methanococcus vannielii SB chromosome, complete genomenuclease3e-1169.3
NC_012491:3704000:371231537123153713247933Brevibacillus brevis NBRC 100599, complete genomeputative nuclease precursor5e-1168.9
NC_017191:1173989:118155611815561182536981Bacillus amyloliquefaciens XH7 chromosome, complete genomeDNase/RNase endonuclease1e-0964.7
NC_017188:1172181:117997911799791180959981Bacillus amyloliquefaciens TA208 chromosome, complete genomethermonuclease1e-0964.7
NC_000964:1873398:189458618945861895221636Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0963.9
NC_014551:1872000:188027118802711881236966Bacillus amyloliquefaciens DSM 7, complete genomethermonuclease precursor1e-0963.9
NC_014976:17909:213822138222017636Bacillus subtilis BSn5 chromosome, complete genomeDNA nuclease, lipoprotein2e-0963.5
NC_019896:2158223:217364121736412174276636Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein2e-0963.5
NC_017190:2130651:227652522765252277508984Bacillus amyloliquefaciens LL3 chromosome, complete genomethermonuclease2e-0963.2
NC_020244:1875834:190126919012691901904636Bacillus subtilis XF-1, complete genomeDNA nuclease, lipoprotein3e-0963.2
NC_020410:2068500:208447120844712085436966Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeSPBc2 prophage-derived endonuclease yokF3e-0963.2
NC_019842:2134803:214968321496832150648966Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,micrococcal nuclease3e-0963.2
NC_016047:1978312:199667619966761997377702Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completethermonuclease3e-0962.8
NC_013849:397947:409085409085409888804Ferroglobus placidus DSM 10642 chromosome, complete genomenuclease (SNase domain protein)4e-0962.4
NC_014479:1831404:185024218502421850685444Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeSPbeta phage DNA nuclease, lipoprotein5e-0962
NC_015667:16511:2201622016234251410Halopiger xanaduensis SH-6 plasmid pHALXA02, complete sequencenuclease5e-0962
NC_017195:1852935:187656318765631877201639Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completethermonuclease6e-0962
NC_020063:2565605:259868225986822599272591Enterobacteriaceae bacterium strain FGI 57, complete genomeputative membrane-bound metal-dependent hydrolase8e-0961.6
NC_006511:1579776:159665015966501597237588Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-0861.2
NC_016856:1411579:141157914115791412166588Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-0861.2
NC_016860:1399290:139929013992901399877588Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-0861.2
NC_011274:1850086:186694518669451867544600Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-0860.8
NC_010102:1703172:172003217200321720631600Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0860.8
NC_003197:1401603:140160314016031402202600Salmonella typhimurium LT2, complete genomeputative SOS response protein1e-0860.8
NC_011205:1938574:195542319554231956022600Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-0860.8
NC_011294:1810285:182713418271341827733600Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-0860.8
NC_016810:1358456:135845613584561359055600Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-0860.8
NC_016831:1166868:116686811668681167467600Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-0860.8
NC_016857:1358456:135845613584561359055600Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74inner membrane protein YdjM1e-0860.8
NC_016863:1359769:135976913597691360368600Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-0860.8
NC_017046:1358531:135853113585311359130600Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-0860.8
NC_010379:73718:907459074591416672Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequencethermonuclease (TNase) (Micrococcal nuclease)(Staphylococcal nuclease)1e-0860.5
NC_007517:3430237:344916434491643449706543Geobacter metallireducens GS-15, complete genomeSNase-like nuclease2e-0860.5
NC_008148:2053467:207091520709152071490576Rubrobacter xylanophilus DSM 9941, complete genomenuclease (SNase-like)2e-0860.1
UCMB5137:2054735:206663720666372067335699Bacillus atrophaeus UCMB-5137hypothetical protein2e-0860.1
NC_013062:1141865:115541311554131156111699Flavobacteriaceae bacterium 3519-10, complete genomeprophage LambdaCh01, nuclease domain protein3e-0859.7
NC_016832:1269018:126901812690181269617600Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Inner membrane protein ydjM4e-0859.3
NC_003198:1693623:171048617104861711085600Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-0859.3
NC_015601:1229909:125040912504091250930522Erysipelothrix rhusiopathiae str. Fujisawa, complete genomethermonuclease1e-0757.8
NC_000918:465627:486617486617487135519Aquifex aeolicus VF5, complete genomethermococcal nuclease homolog2e-0757
NC_012438:192065:198467198467198997531Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomethermonuclease2e-0756.6
NC_013526:911909:9211449211449222951152Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomenuclease (SNase domain protein)8e-0755.1
NC_009715:1829978:186455318645531864999447Campylobacter curvus 525.92 chromosome, complete genomeATP-dependent hsl protease ATP-binding subunit HslU2e-0653.5
NC_014228:1712339:174173717417371742315579Xenorhabdus nematophila ATCC 19061, complete genomeputative LexA regulated gene, SOS response2e-0653.5