Pre_GI: BLASTP Hits

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Query: NC_008148:1567703:1577597 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1577597, End: 1578781, Length: 1185

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008148:792610:8041138041138053991287Rubrobacter xylanophilus DSM 9941, complete genomeSarcosine oxidase1e-47190
NC_014623:6509000:6511911651191165130321122Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesarcosine oxidase1e-42174
NC_020211:2012480:2038214203821420393291116Serratia marcescens WW4, complete genomeFAD-binding N-methyltryptophan oxidase1e-37157
NC_003143:2741478:2747130274713027482451116Yersinia pestis CO92, complete genomeputative sarcosine oxidase1e-35151
NC_005810:2508671:2517054251705425181691116Yersinia pestis biovar Microtus str. 91001, complete genomeN-methyltryptophan oxidase1e-35151
NC_008150:2173708:2177647217764721787621116Yersinia pestis Antiqua, complete genomeputative sarcosine oxidase1e-35151
NC_017168:2999514:3014188301418830153031116Yersinia pestis A1122 chromosome, complete genomeN-methyltryptophan oxidase1e-35151
NC_004088:1909880:1923586192358619247011116Yersinia pestis KIM, complete genomesarcosine oxidase-like protein9e-36151
NC_007492:2629350:2635450263545026366101161Pseudomonas fluorescens PfO-1, complete genomeSarcosine oxidase2e-33143
NC_011887:110618:1196411196411207951155Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete7e-28125
NC_015410:3093465:3147996314799631491351140Pseudomonas mendocina NK-01 chromosome, complete genomeN-methyltryptophan oxidase4e-26119
NC_008319:262894:2794732794732806271155Synechococcus sp. CC9311, complete genomeputative sarcosine oxidase2e-1893.6
NC_008009:5139896:5153936515393651550271092Acidobacteria bacterium Ellin345, complete genomeFAD dependent oxidoreductase7e-1892
NC_002947:4293252:4303152430315243043001149Pseudomonas putida KT2440, complete genomesarcosine oxidase, putative1e-1584.7
NC_007511:1300978:1305473130547313068071335Burkholderia sp. 383 chromosome 2, complete sequenceFAD dependent oxidoreductase1e-1274.7
NC_009328:2378345:2400547240054724017731227Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeSoxB-like sarcosine oxidase subunit beta related2e-1273.6
NC_014623:723089:7317827317827329931212Stigmatella aurantiaca DW4/3-1 chromosome, complete genomefad dependent oxidoreductase5e-1272.4
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase5e-1168.9
NC_010623:1871492:1896546189654618977031158Burkholderia phymatum STM815 chromosome 2, complete sequenceFAD dependent oxidoreductase1e-0964.7
NC_009718:643200:6625756625756637471173Fervidobacterium nodosum Rt17-B1, complete genomeFAD dependent oxidoreductase2e-0963.9
NC_016641:2773757:2781634278163427828421209Paenibacillus terrae HPL-003 chromosome, complete genomesarcosine oxidase subunit beta4e-0962.8
NC_016626:1592781:1596766159676615980941329Burkholderia sp. YI23 plasmid byi_1p, complete sequenceFAD dependent oxidoreductase3e-0756.6
NC_009328:3322802:3330853333085333319261074Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesarcosine oxidase subunit beta7e-0652