Pre_GI: BLASTP Hits

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Query: NC_008146:4936262:4954831 Mycobacterium sp. MCS, complete genome

Start: 4954831, End: 4955787, Length: 957

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:4975402:499248949924894993445957Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF350648
NC_009077:5286275:530610253061025307055954Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF352e-180631
NC_003155:5163382:516607551660755167025951Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-48193
NC_021177:4124839:4142776414277641438161041Streptomyces fulvissimus DSM 40593, complete genomeDUF35 multi-domain protein2e-47189
NC_017904:1896322:191263319126331913208576Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein4e-22105
NC_017904:1896322:191222019122201912633414Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein8e-2097.8
NC_007953:504939:524735524735525166432Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein3e-1686.3
NC_017904:5543490:555315055531505553575426Mycobacterium sp. MOTT36Y chromosome, complete genomeacyl dehydratase6e-1065.1
NC_008595:1951887:195618819561881956607420Mycobacterium avium 104, complete genomeprotein of unknown function DUF352e-0963.2
NC_012522:7763426:777773277777327778145414Rhodococcus opacus B4, complete genomehypothetical protein4e-0962.8
NC_016948:1796989:1814359181435918159781620Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein5e-0962
NC_008595:2661019:267867826786782679112435Mycobacterium avium 104, complete genomehypothetical protein3e-0859.7
NC_015576:4070195:407976940797694080182414Mycobacterium sp. JDM601 chromosome, complete genomehypothetical protein7e-0858.2
NC_007953:572926:601264601264601677414Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein2e-0757
NC_003888:5042283:506185950618595062311453Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0756.6
NC_000909:1517461:152831815283181528743426Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein3e-0756.2
NC_008595:1911491:191382219138221914271450Mycobacterium avium 104, complete genomeacyl dehydratase1e-0654.3
NC_008595:1951887:195780119578011958157357Mycobacterium avium 104, complete genomehypothetical protein1e-0654.3
NC_015847:1261276:128771612877161288108393Methanococcus maripaludis XI chromosome, complete genomehypothetical protein1e-0654.3
NC_016948:2931285:295757129575712957894324Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein2e-0653.1
NC_015379:2505233:252861225286122529025414Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-0653.1
NC_014098:1258559:126649412664941266907414Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF354e-0652.4
NC_015312:1893945:190847219084721908936465Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein6e-0652
NC_016947:1455744:145912814591281459451324Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein6e-0652
NC_015684:3157941:316332031633203163718399Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein5e-0652
NC_015562:1460124:147704114770411477436396Methanotorris igneus Kol 5 chromosome, complete genomehypothetical protein5e-0652
NC_014814:169374:190911190911191369459Mycobacterium sp. Spyr1 chromosome, complete genomenucleic-acid-binding protein containing a Zn-ribbon9e-0651.2
NC_015957:639774:659685659685660155471Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein9e-0651.2
NC_008595:2687245:270237827023782702701324Mycobacterium avium 104, complete genomehypothetical protein9e-0651.2