Pre_GI: BLASTP Hits

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Query: NC_007953:504939:524735 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 524735, End: 525166, Length: 432

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:5163382:516607551660755167025951Streptomyces avermitilis MA-4680, complete genomehypothetical protein4e-31132
NC_021177:4124839:4142776414277641438161041Streptomyces fulvissimus DSM 40593, complete genomeDUF35 multi-domain protein4e-28123
NC_017904:1896322:191222019122201912633414Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein4e-23106
NC_008595:2661019:267867826786782679112435Mycobacterium avium 104, complete genomehypothetical protein1e-1995.1
NC_015312:1893945:190847219084721908936465Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein1e-1788.2
NC_015684:3157941:316332031633203163718399Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein3e-1787
NC_014098:1258559:126649412664941266907414Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF353e-1787
NC_008146:4936262:495483149548314955787957Mycobacterium sp. MCS, complete genomeprotein of unknown function DUF355e-1786.3
NC_008705:4975402:499248949924894993445957Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF355e-1786.3
NC_009077:5286275:530610253061025307055954Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF351e-1684.7
NC_007953:572926:601264601264601677414Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein3e-1684
NC_016948:1796989:1814359181435918159781620Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein1e-1478.2
NC_016604:3184855:319610031961003196558459Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative nucleic-acid-binding protein containing a Zn-ribbon2e-1477.8
NC_008595:1911491:191382219138221914271450Mycobacterium avium 104, complete genomeacyl dehydratase2e-1477.8
NC_015576:4070195:407976940797694080182414Mycobacterium sp. JDM601 chromosome, complete genomehypothetical protein3e-1477
NC_009077:1725683:174788617478861748344459Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF355e-1476.3
NC_008705:1790222:181242518124251812883459Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF355e-1476.3
NC_008726:549102:572743572743573201459Mycobacterium vanbaalenii PYR-1, complete genomeprotein of unknown function DUF355e-1476.3
NC_009338:555587:581871581871582329459Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein5e-1476.3
NC_009338:630130:655555655555656013459Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein5e-1476.3
NC_015379:2505233:252861225286122529025414Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-1375.5
NC_014814:169374:190911190911191369459Mycobacterium sp. Spyr1 chromosome, complete genomenucleic-acid-binding protein containing a Zn-ribbon4e-1373.2
NC_008595:2661019:266952926695292669984456Mycobacterium avium 104, complete genomeprotein of unknown function DUF354e-1373.2
NC_012522:7763426:777773277777327778145414Rhodococcus opacus B4, complete genomehypothetical protein2e-1271.2
NC_014640:4193193:420049642004964200894399Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein6e-1269.3
NC_018581:3202281:3213616321361632152891674Gordonia sp. KTR9 chromosome, complete genomeAcetyl-CoA acetyltransferase1e-1168.2
NC_008595:1951887:195780119578011958157357Mycobacterium avium 104, complete genomehypothetical protein2e-1167.8
NC_007974:2097334:213840221384022138827426Ralstonia metallidurans CH34 chromosome 2, complete sequenceprotein of unknown function DUF352e-1064.7
NC_015562:1460124:147704114770411477436396Methanotorris igneus Kol 5 chromosome, complete genomehypothetical protein2e-1064.7
NC_009637:438037:469568469568469960393Methanococcus maripaludis C7 chromosome, complete genomehypothetical protein3e-1063.5
NC_018581:4992952:499992049999205000363444Gordonia sp. KTR9 chromosome, complete genomeputative nucleic-acid-binding protein6e-1062.8
NC_008726:925895:929656929656930078423Mycobacterium vanbaalenii PYR-1, complete genomeprotein of unknown function DUF358e-1062.4
NC_009135:330628:338195338195338587393Methanococcus maripaludis C5, complete genomeprotein of unknown function DUF359e-1062.4
NC_015680:21500:389103891039314405Pyrococcus yayanosii CH1 chromosome, complete genomeacaC protein2e-0961.2
NC_008705:3430839:343455434345543434991438Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF352e-0960.8
NC_009077:3376351:338006633800663380503438Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF352e-0960.8
NC_008146:3401743:340627234062723406709438Mycobacterium sp. MCS, complete genomeprotein of unknown function DUF352e-0960.8
NC_016947:2380500:239491823949182395355438Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein2e-0960.8
NC_015847:1261276:128771612877161288108393Methanococcus maripaludis XI chromosome, complete genomehypothetical protein2e-0960.8
NC_003413:916398:933469933469933879411Pyrococcus furiosus DSM 3638, complete genomehypothetical protein3e-0960.5
NC_000961:597385:600840600840601244405Pyrococcus horikoshii OT3, complete genomehypothetical protein3e-0960.5
NC_000909:1517461:152831815283181528743426Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein4e-0960.1
NC_008595:1951887:195618819561881956607420Mycobacterium avium 104, complete genomeprotein of unknown function DUF356e-0959.3
NC_008278:2882567:288216928821692882570402Frankia alni ACN14a, complete genomehypothetical protein1e-0858.9
NC_008278:2863355:288216928821692882570402Frankia alni ACN14a, complete genomehypothetical protein1e-0858.9
NC_015474:1185478:118677411867741187178405Pyrococcus sp. NA2 chromosome, complete genomeacaC protein1e-0858.5
NC_018531:2085939:208847820884782088918441Arthrobacter sp. Rue61a chromosome, complete genomenucleic-acid-binding protein containinga Zn-ribbon2e-0857.8
NC_015656:3200500:3214122321412232156931572Frankia symbiont of Datisca glomerata chromosome, complete genomehypothetical protein2e-0857.4
NC_016885:2294000:231294123129412313396456Pyrobaculum oguniense TE7 chromosome, complete genomeputative nucleic-acid-binding protein containing a Zn-ribbon4e-0857
NC_003364:1282000:129238512923851292786402Pyrobaculum aerophilum str. IM2, complete genomeconserved protein associated with acetyl-CoA C-acyltransferase5e-0856.6
NC_009921:5508000:552653455265345526995462Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF355e-0856.2
NC_017904:5543490:555315055531505553575426Mycobacterium sp. MOTT36Y chromosome, complete genomeacyl dehydratase6e-0856.2
NC_002927:3716894:376731237673123767734423Bordetella bronchiseptica RB50, complete genomehypothetical protein8e-0855.8
NC_015518:1160430:117701811770181177425408Acidianus hospitalis W1 chromosome, complete genomehypothetical protein3e-0753.9
NC_013769:2363980:237608723760872376623537Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein3e-0753.9
NC_012589:2379709:239301523930152393551537Sulfolobus islandicus L.S.2.15, complete genomeprotein of unknown function DUF353e-0753.9
NC_003901:1027183:102782710278271028225399Methanosarcina mazei Go1, complete genomehypothetical protein4e-0753.5
NC_016948:2931285:295757129575712957894324Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein4e-0753.5
NC_012726:2249831:226195422619542262490537Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein6e-0752.8
NC_012632:2352784:236490423649042365440537Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein6e-0752.8
NC_012588:2249874:226169322616932262229537Sulfolobus islandicus M.14.25 chromosome, complete genomehypothetical protein6e-0752.8
NC_017275:2283074:229536322953632295899537Sulfolobus islandicus HVE10/4 chromosome, complete genomehypothetical protein6e-0752.8
NC_012623:277113:284645284645285181537Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein6e-0752.8
NC_012622:2319598:233664523366452337181537Sulfolobus islandicus Y.G.57.14 chromosome, complete genomehypothetical protein6e-0752.8
NC_002754:2621884:262602226260222626558537Sulfolobus solfataricus P2, complete genomehypothetical protein6e-0752.8
NC_021184:657093:671735671735672154420Desulfotomaculum gibsoniae DSM 7213, complete genomeputative nucleic-acid-binding protein containing a Zn-ribbon7e-0752.8
NC_008595:2687245:270237827023782702701324Mycobacterium avium 104, complete genomehypothetical protein9e-0752.4
NC_014640:4951076:497862949786294979018390Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein1e-0652
NC_003106:91339:102665102665103195531Sulfolobus tokodaii str. 7, complete genomehypothetical protein1e-0652
NC_008278:175500:187150187150187554405Frankia alni ACN14a, complete genomehypothetical protein2e-0651.2
NC_016947:1455744:145912814591281459451324Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein3e-0650.4
NC_009654:4716417:473844847384484738885438Marinomonas sp. MWYL1, complete genomehypothetical protein5e-0650.1
NC_015976:814922:816103816103816531429Sphingobium sp. SYK-6, complete genomehypothetical protein5e-0649.7
NC_007181:915000:923562923562924089528Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein5e-0649.7
NC_017276:2161535:217382421738242174360537Sulfolobus islandicus REY15A chromosome, complete genomehypothetical protein6e-0649.7