Pre_GI: BLASTP Hits

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Query: NC_007952:495000:508125 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 508125, End: 508388, Length: 264

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007511:3371319:337944733794473379713267Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein5e-24109
NC_012856:1585989:159821515982151598499285Ralstonia pickettii 12D chromosome 1, complete genomePAAR repeat-containing protein7e-1682.4
NC_012962:3568046:358257535825753582832258Photorhabdus asymbiotica, complete genomehypothetical protein8e-1475.9
NC_005126:3812054:383533638353363835593258Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-1372.8
NC_008390:235155:246714246714246995282Burkholderia cepacia AMMD chromosome 1, complete sequencePAAR repeat-containing protein3e-1270.9
NC_014323:816027:838891838891839148258Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein4e-1270.1
NC_014733:1223359:124555012455501246419870Methylovorus sp. MP688 chromosome, complete genomepaar repeat-containing protein5e-1269.7
NC_007651:3064530:310077231007723101038267Burkholderia thailandensis E264 chromosome I, complete sequencePAAR motif family1e-1065.5
NC_014323:992978:103409510340951034361267Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein1e-1065.1
NC_010557:1030319:104828910482891048540252Burkholderia ambifaria MC40-6 chromosome 3, complete sequencePAAR repeat-containing protein2e-1064.7
NC_005773:106000:136114136114136368255Pseudomonas syringae pv. phaseolicola 1448A, complete genomegp282e-1064.3
NC_010551:1412139:142465314246531424904252Burkholderia ambifaria MC40-6 chromosome 1, complete sequencePAAR repeat-containing protein3e-1063.9
NC_007005:5882205:589256558925655892873309Pseudomonas syringae pv. syringae B728a, complete genomePAAR3e-1063.5
NC_010557:1030319:104723310472331047484252Burkholderia ambifaria MC40-6 chromosome 3, complete sequencePAAR repeat-containing protein4e-1063.5
NC_010625:229478:244652244652244936285Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencePAAR repeat-containing protein5e-1063.2
NC_011000:2514897:252119925211992521462264Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-1062.8
NC_011000:2514897:251954525195452519808264Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-1062.8
NC_011000:1262324:127654512765451276796252Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-1062.8
NC_012724:1781554:179354617935461793827282Burkholderia glumae BGR1 chromosome 1, complete genomePAAR repeat-containing protein1e-0962.4
NC_009256:1282793:129863812986381298889252Burkholderia vietnamiensis G4 chromosome 1, complete sequencePAAR repeat-containing protein8e-1062.4
NC_011000:2732330:273902427390242739275252Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-0961.6
NC_009256:2509806:252862125286212528872252Burkholderia vietnamiensis G4 chromosome 1, complete sequencePAAR repeat-containing protein2e-0961.6
NC_007511:1094050:110853411085341108815282Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein2e-0961.2
NC_014931:6031645:603710260371026037395294Variovorax paradoxus EPS chromosome, complete genomePAAR repeat-containing protein3e-0960.5
NC_012725:97681:110044110044110295252Burkholderia glumae BGR1 plasmid bglu_4p, complete sequencePAAR repeat-containing protein3e-0960.5
NC_017168:144000:151853151853152158306Yersinia pestis A1122 chromosome, complete genomehypothetical protein7e-0959.3
NC_009381:720000:727830727830728135306Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein7e-0959.3
NC_005810:4045303:405809040580904058395306Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein7e-0959.3
NC_008391:271254:285825285825286103279Burkholderia cepacia AMMD chromosome 2, complete sequencePAAR repeat-containing protein8e-0958.9
NC_012725:97681:108589108589108840252Burkholderia glumae BGR1 plasmid bglu_4p, complete sequencePAAR repeat-containing protein1e-0858.5
NC_015377:34445:564325643256683252Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencePAAR repeat-containing protein1e-0858.5
NC_015377:34445:549805498055228249Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencePAAR repeat-containing protein2e-0857.4
NC_017060:125480:138629138629138892264Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein2e-0857.4
NC_015062:130359:141799141799142062264Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein2e-0857.4
NC_008390:2448379:246028124602812460532252Burkholderia cepacia AMMD chromosome 1, complete sequencePAAR repeat-containing protein3e-0857.4
NC_003295:998000:101061510106151010881267Ralstonia solanacearum GMI1000, complete genomehypothetical protein4e-0856.6
NC_010805:1576735:158550615855061585784279Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein7e-0856.2
NC_010086:871723:889520889520889798279Burkholderia multivorans ATCC 17616 chromosome 2, completePAAR repeat-containing protein7e-0856.2
NC_010067:2529750:254301525430152543278264Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-0856.2
NC_012721:710887:722617722617722877261Burkholderia glumae BGR1 chromosome 2, complete genomePAAR1e-0755.5
NC_016612:5600177:560787956078795608145267Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-0755.1
NC_010681:1:157651576516016252Burkholderia phytofirmans PsJN chromosome 1, complete sequencePAAR repeat-containing protein1e-0755.1
NC_016626:400080:421405421405421656252Burkholderia sp. YI23 plasmid byi_1p, complete sequencePAAR motif-containing protein2e-0755.1
NC_003295:3421520:347780734778073478079273Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-0755.1
NC_015136:813701:824507824507824773267Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein2e-0754.7
NC_013971:3117000:312800031280003128263264Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-0754.3
NC_007347:1:234672346723727261Ralstonia eutropha JMP134 chromosome 1, complete sequencePAAR2e-0754.3
NC_012721:1395417:140494314049431405194252Burkholderia glumae BGR1 chromosome 2, complete genomePAAR3e-0753.9
NC_007650:84140:104401104401104664264Burkholderia thailandensis E264 chromosome II, complete sequencePAAR motif family3e-0753.9
NC_007651:3656433:367803936780393678302264Burkholderia thailandensis E264 chromosome I, complete sequencePAAR motif family3e-0753.9
NC_012962:4427000:444148144414814441753273Photorhabdus asymbiotica, complete genomehypothetical protein4e-0753.5
NC_013282:2026083:204892020489202049183264Cronobacter turicensis, complete genomehypothetical protein4e-0753.5
NC_007435:1914375:193414619341461934409264Burkholderia pseudomallei 1710b chromosome II, complete sequencePAAR motif family8e-0752.4
NC_005126:4919689:493172149317214931996276Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein8e-0752.4
NC_010508:1206498:121747312174731217886414Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencePAAR repeat-containing protein1e-0652
NC_008027:558507:575865575865576128264Pseudomonas entomophila L48, complete genomehypothetical protein1e-0652
NC_009075:92210:114950114950115213264Burkholderia pseudomallei 668 chromosome II, complete sequencepaar motif family2e-0651.6
NC_009078:74954:950689506895331264Burkholderia pseudomallei 1106a chromosome II, complete sequencepaar motif family2e-0651.6
NC_006351:73000:956249562495887264Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein2e-0651.6
NC_006351:1631760:163176016317601632023264Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein2e-0651.6
NC_009078:1578500:157867515786751578938264Burkholderia pseudomallei 1106a chromosome II, complete sequencePAAR motif family protein2e-0651.6
NC_014539:3619511:362747036274703627745276Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein2e-0651.2
NC_007435:305937:305937305937306200264Burkholderia pseudomallei 1710b chromosome II, complete sequencePAAR motif family2e-0651.2
NC_010804:2206000:221384922138492214256408Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein3e-0650.8
NC_010084:1299387:131051713105171310924408Burkholderia multivorans ATCC 17616 chromosome 1, completePAAR repeat-containing protein3e-0650.8
NC_009075:1638789:164416516441651644428264Burkholderia pseudomallei 668 chromosome II, complete sequencepaar motif family2e-0650.8
NC_010501:3575726:358865735886573588917261Pseudomonas putida W619, complete genomePAAR repeat-containing protein2e-0650.8
NC_007650:2429307:244551924455192446046528Burkholderia thailandensis E264 chromosome II, complete sequencegp293e-0650.4
NC_006351:520500:535170535170535697528Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein3e-0650.4
NC_008390:2018201:203105920310592031466408Burkholderia cepacia AMMD chromosome 1, complete sequencePAAR repeat-containing protein4e-0650.4
NC_012724:3070386:307799930779993078403405Burkholderia glumae BGR1 chromosome 1, complete genomePAAR repeat-containing protein5e-0649.7
NC_012962:3463644:3494572349457234984113840Photorhabdus asymbiotica, complete genomehypothetical protein8e-0649.3
NC_013961:629307:643107643107643301195Erwinia amylovora, complete genomehypothetical protein1e-0548.9