Pre_GI: BLASTP Hits

Some Help

Query: NC_007952:1293024:1306147 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1306147, End: 1306533, Length: 387

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007951:2233676:224135922413592241745387Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein8e-43172
NC_016626:1592781:159875015987501599136387Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative transposase2e-23107
NC_011000:3514338:354232235423223542705384Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transposase1e-22105
NC_011000:1262324:126717112671711267554384Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transposase1e-22105
NC_010512:1015557:104074910407491041132384Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetransposase IS3/IS911 family protein2e-22104
NC_007908:1252189:125737812573781257782405Rhodoferax ferrireducens T118, complete genometransposase IS3/IS9113e-0960.5
NC_007908:3363902:338422333842233384627405Rhodoferax ferrireducens T118, complete genometransposase IS3/IS9113e-0960.5
NC_004578:6334735:635962463596246359956333Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-0858.9
NC_015422:3184823:319825931982593198687429Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein1e-0858.2
NC_014910:1912552:192794719279471928375429Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein1e-0858.2
NC_015422:2858228:291509529150952915523429Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein1e-0858.2
NC_014910:1591003:159744815974481597876429Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein1e-0858.2
NC_020209:1949500:196102319610231961355333Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-0857.4
NC_008782:2568027:261179026117902612242453Acidovorax sp. JS42, complete genometransposase IS3/IS911 family protein7e-0855.8
NC_016830:2642881:264842826484282648760333Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein1e-0755.5
NC_016830:5994494:601302060130206013352333Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein1e-0755.5
NC_016830:952342:964653964653964985333Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein1e-0755.5
NC_020209:397376:429924429924430241318Pseudomonas poae RE*1-1-14, complete genomeISPpu14, transposase Orf12e-0754.7
NC_012660:5793200:582548558254855825802318Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transposase3e-0753.9
NC_015379:4630367:464368946436894644021333Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family5e-0753.1
NC_015379:908904:964303964303964644342Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family6e-0752.8
NC_015379:2575000:259716425971642597505342Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family6e-0752.8
NC_018691:1322389:133712113371211337423303Alcanivorax dieselolei B5 chromosome, complete genomeTransposase-like protein8e-0752.4
NC_018691:1822731:184813918481391848441303Alcanivorax dieselolei B5 chromosome, complete genomeTransposase-like protein8e-0752.4
NC_018691:3525430:354012335401233540425303Alcanivorax dieselolei B5 chromosome, complete genomeTransposase-like protein8e-0752.4
NC_016830:3869572:392236539223653922730366Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein1e-0652
NC_004578:4869673:488083348808334881072240Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-0651.6
NC_010002:3399770:340977834097783410221444Delftia acidovorans SPH-1, complete genometransposase IS3/IS911 family protein4e-0650.1